Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09551 | COLO4_10665 | A0A1R3KBP9 | A0A1R3K783 | C2H2-type domain-containing protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.991 |
COLO4_09551 | COLO4_16588 | A0A1R3KBP9 | A0A1R3JGP0 | C2H2-type domain-containing protein. | Nucleoporin protein. | 0.990 |
COLO4_09551 | COLO4_17263 | A0A1R3KBP9 | A0A1R3JDE1 | C2H2-type domain-containing protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.895 |
COLO4_09551 | COLO4_22300 | A0A1R3KBP9 | A0A1R3IMY9 | C2H2-type domain-containing protein. | Nuclear pore protein. | 0.993 |
COLO4_09551 | COLO4_25704 | A0A1R3KBP9 | A0A1R3I0B6 | C2H2-type domain-containing protein. | Uncharacterized protein. | 0.995 |
COLO4_10665 | COLO4_09551 | A0A1R3K783 | A0A1R3KBP9 | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | C2H2-type domain-containing protein. | 0.991 |
COLO4_10665 | COLO4_16588 | A0A1R3K783 | A0A1R3JGP0 | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | Nucleoporin protein. | 0.997 |
COLO4_10665 | COLO4_17263 | A0A1R3K783 | A0A1R3JDE1 | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.872 |
COLO4_10665 | COLO4_22300 | A0A1R3K783 | A0A1R3IMY9 | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | Nuclear pore protein. | 0.997 |
COLO4_10665 | COLO4_25704 | A0A1R3K783 | A0A1R3I0B6 | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | Uncharacterized protein. | 0.989 |
COLO4_15958 | COLO4_17263 | A0A1R3JKQ8 | A0A1R3JDE1 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.877 |
COLO4_15958 | COLO4_30962 | A0A1R3JKQ8 | A0A1R3H665 | Uncharacterized protein. | RNA-processing protein, HAT helix. | 0.986 |
COLO4_15958 | COLO4_31569 | A0A1R3JKQ8 | A0A1R3H431 | Uncharacterized protein. | RNA-processing protein, HAT helix. | 0.986 |
COLO4_16588 | COLO4_09551 | A0A1R3JGP0 | A0A1R3KBP9 | Nucleoporin protein. | C2H2-type domain-containing protein. | 0.990 |
COLO4_16588 | COLO4_10665 | A0A1R3JGP0 | A0A1R3K783 | Nucleoporin protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.997 |
COLO4_16588 | COLO4_17263 | A0A1R3JGP0 | A0A1R3JDE1 | Nucleoporin protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.893 |
COLO4_16588 | COLO4_22300 | A0A1R3JGP0 | A0A1R3IMY9 | Nucleoporin protein. | Nuclear pore protein. | 0.999 |
COLO4_16588 | COLO4_25704 | A0A1R3JGP0 | A0A1R3I0B6 | Nucleoporin protein. | Uncharacterized protein. | 0.993 |
COLO4_17263 | COLO4_09551 | A0A1R3JDE1 | A0A1R3KBP9 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | C2H2-type domain-containing protein. | 0.895 |
COLO4_17263 | COLO4_10665 | A0A1R3JDE1 | A0A1R3K783 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.872 |
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