Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_00215 | COLO4_09938 | A0A1R3L4E4 | A0A1R3KAJ7 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.965 |
COLO4_00215 | COLO4_14514 | A0A1R3L4E4 | A0A1R3JRV8 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-CoA oxidase/dehydrogenase, type 1. | 0.981 |
COLO4_00215 | COLO4_16801 | A0A1R3L4E4 | A0A1R3JFD6 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.772 |
COLO4_00215 | COLO4_20312 | A0A1R3L4E4 | A0A1R3J0F3 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
COLO4_00215 | COLO4_21181 | A0A1R3L4E4 | A0A1R3IV64 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.901 |
COLO4_00215 | COLO4_23405 | A0A1R3L4E4 | A0A1R3IGX2 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.901 |
COLO4_00215 | COLO4_31943 | A0A1R3L4E4 | A0A1R3H2Y7 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | C2 calcium-dependent membrane targeting. | 0.892 |
COLO4_00215 | COLO4_37120 | A0A1R3L4E4 | A0A1R3G3B9 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.977 |
COLO4_00215 | COLO4_37470 | A0A1R3L4E4 | A0A1R3G1F6 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.913 |
COLO4_05870 | COLO4_16801 | A0A1R3KPM9 | A0A1R3JFD6 | Peroxin-3. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.610 |
COLO4_05870 | COLO4_20312 | A0A1R3KPM9 | A0A1R3J0F3 | Peroxin-3. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.441 |
COLO4_05870 | COLO4_37470 | A0A1R3KPM9 | A0A1R3G1F6 | Peroxin-3. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.441 |
COLO4_09938 | COLO4_00215 | A0A1R3KAJ7 | A0A1R3L4E4 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.965 |
COLO4_09938 | COLO4_14514 | A0A1R3KAJ7 | A0A1R3JRV8 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Acyl-CoA oxidase/dehydrogenase, type 1. | 0.907 |
COLO4_09938 | COLO4_16801 | A0A1R3KAJ7 | A0A1R3JFD6 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.604 |
COLO4_09938 | COLO4_20312 | A0A1R3KAJ7 | A0A1R3J0F3 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.976 |
COLO4_09938 | COLO4_21181 | A0A1R3KAJ7 | A0A1R3IV64 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.558 |
COLO4_09938 | COLO4_23405 | A0A1R3KAJ7 | A0A1R3IGX2 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Glycoside hydrolase, family 17; Belongs to the glycosyl hydrolase 17 family. | 0.558 |
COLO4_09938 | COLO4_31943 | A0A1R3KAJ7 | A0A1R3H2Y7 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | C2 calcium-dependent membrane targeting. | 0.965 |
COLO4_09938 | COLO4_37120 | A0A1R3KAJ7 | A0A1R3G3B9 | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.920 |
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