STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_16736Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
COLO4_06962
Ketose-bisphosphate aldolase, class-II.
  
 0.974
COLO4_37470
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.931
COLO4_31943
C2 calcium-dependent membrane targeting.
  
 0.931
COLO4_20312
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.931
COLO4_00215
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.931
COLO4_26388
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.810
COLO4_12452
Uncharacterized protein.
 
 0.809
COLO4_12970
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.802
COLO4_09055
Biotin/lipoyl attachment.
  
 0.798
COLO4_11171
Ribosomal protein S23/S29, mitochondrial.
   
 
 0.797
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.