STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_16432Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (364 aa)    
Predicted Functional Partners:
COLO4_10760
Trehalase.
  
 0.942
COLO4_16975
Glycosyl transferase, family 20.
 
  
 0.907
COLO4_19520
Glycosyl transferase, family 20.
 
  
 0.895
COLO4_34062
Glycosyl transferase, family 20.
 
  
 0.890
COLO4_27627
Glycosyl transferase, family 20.
 
  
  0.889
COLO4_17468
Glycosyl transferase, family 20.
 
  
 0.868
COLO4_31226
Glycosyl transferase, family 20.
 
  
  0.863
COLO4_22823
Uncharacterized protein; Belongs to the peptidase S8 family.
  
  
 0.863
COLO4_04801
Glycosyl transferase, family 20.
  
  
 0.778
COLO4_16062
Glycosyl transferase, family 20.
  
  
 0.775
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.