Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_06280 | COLO4_16369 | A0A1R3KNF9 | A0A1R3JHX1 | Uncharacterized protein. | PMD domain-containing protein. | 0.757 |
COLO4_07087 | COLO4_09498 | A0A1R3KKW7 | A0A1R3KC10 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.969 |
COLO4_07087 | COLO4_12801 | A0A1R3KKW7 | A0A1R3JZU2 | Ubiquitin. | Uncharacterized protein. | 0.894 |
COLO4_07087 | COLO4_16369 | A0A1R3KKW7 | A0A1R3JHX1 | Ubiquitin. | PMD domain-containing protein. | 0.856 |
COLO4_07087 | COLO4_17325 | A0A1R3KKW7 | A0A1R3JD70 | Ubiquitin. | Armadillo. | 0.794 |
COLO4_07087 | COLO4_23165 | A0A1R3KKW7 | A0A1R3IC31 | Ubiquitin. | Ubiquitin. | 0.999 |
COLO4_07087 | COLO4_27086 | A0A1R3KKW7 | A0A1R3HT55 | Ubiquitin. | E3 ubiquitin-protein ligase. | 0.992 |
COLO4_07087 | COLO4_31893 | A0A1R3KKW7 | A0A1R3H2W1 | Ubiquitin. | E3 ubiquitin-protein ligase. | 0.971 |
COLO4_09498 | COLO4_07087 | A0A1R3KC10 | A0A1R3KKW7 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | Ubiquitin. | 0.969 |
COLO4_09498 | COLO4_14341 | A0A1R3KC10 | A0A1R3HDI7 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | Ubiquitin. | 0.969 |
COLO4_09498 | COLO4_16369 | A0A1R3KC10 | A0A1R3JHX1 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | PMD domain-containing protein. | 0.792 |
COLO4_09498 | COLO4_23165 | A0A1R3KC10 | A0A1R3IC31 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | Ubiquitin. | 0.982 |
COLO4_09498 | COLO4_31893 | A0A1R3KC10 | A0A1R3H2W1 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | E3 ubiquitin-protein ligase. | 0.915 |
COLO4_12801 | COLO4_07087 | A0A1R3JZU2 | A0A1R3KKW7 | Uncharacterized protein. | Ubiquitin. | 0.894 |
COLO4_12801 | COLO4_14341 | A0A1R3JZU2 | A0A1R3HDI7 | Uncharacterized protein. | Ubiquitin. | 0.894 |
COLO4_12801 | COLO4_16369 | A0A1R3JZU2 | A0A1R3JHX1 | Uncharacterized protein. | PMD domain-containing protein. | 0.678 |
COLO4_12801 | COLO4_23165 | A0A1R3JZU2 | A0A1R3IC31 | Uncharacterized protein. | Ubiquitin. | 0.952 |
COLO4_14341 | COLO4_09498 | A0A1R3HDI7 | A0A1R3KC10 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.969 |
COLO4_14341 | COLO4_12801 | A0A1R3HDI7 | A0A1R3JZU2 | Ubiquitin. | Uncharacterized protein. | 0.894 |
COLO4_14341 | COLO4_16369 | A0A1R3HDI7 | A0A1R3JHX1 | Ubiquitin. | PMD domain-containing protein. | 0.856 |
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