STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_15893Uncharacterized protein. (1248 aa)    
Predicted Functional Partners:
COLO4_25219
Glutamine-Leucine-Glutamine, QLQ.
  
 
 0.531
COLO4_09658
Uncharacterized protein.
  
     0.529
COLO4_24190
Putative disease resistance protein RDL6/RF9-like protein.
  
    0.523
COLO4_35053
Putative DNA binding protein.
  
     0.522
COLO4_03739
Putative Poly(RC)-binding protein.
  
     0.519
COLO4_35922
Uncharacterized protein.
  
     0.517
COLO4_32860
Transcription factor GAMYB.
  
     0.515
COLO4_08269
GTD-binding domain-containing protein.
  
     0.509
COLO4_34842
Uncharacterized protein.
  
     0.507
COLO4_34473
Uncharacterized protein.
  
  
 0.506
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.