Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05189 | COLO4_06539 | A0A1R3KRK1 | A0A1R3KMQ7 | Uncharacterized protein. | UBA/THIF-type NAD/FAD binding protein. | 0.456 |
COLO4_05189 | COLO4_10131 | A0A1R3KRK1 | A0A1R3K9X1 | Uncharacterized protein. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.949 |
COLO4_05189 | COLO4_11455 | A0A1R3KRK1 | A0A1R3K4C2 | Uncharacterized protein. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.949 |
COLO4_05189 | COLO4_15660 | A0A1R3KRK1 | A0A1R3JLU1 | Uncharacterized protein. | Small ubiquitin-related modifier, SUMO. | 0.859 |
COLO4_05189 | COLO4_19083 | A0A1R3KRK1 | A0A1R3J6S1 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.877 |
COLO4_05189 | COLO4_25994 | A0A1R3KRK1 | A0A1R3HZ54 | Uncharacterized protein. | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | 0.453 |
COLO4_06202 | COLO4_06539 | A0A1R3KNM2 | A0A1R3KMQ7 | Leucine-rich repeat, ribonuclease inhibitor subtype. | UBA/THIF-type NAD/FAD binding protein. | 0.592 |
COLO4_06202 | COLO4_09095 | A0A1R3KNM2 | A0A1R3KDB4 | Leucine-rich repeat, ribonuclease inhibitor subtype. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.887 |
COLO4_06202 | COLO4_10131 | A0A1R3KNM2 | A0A1R3K9X1 | Leucine-rich repeat, ribonuclease inhibitor subtype. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.972 |
COLO4_06202 | COLO4_11455 | A0A1R3KNM2 | A0A1R3K4C2 | Leucine-rich repeat, ribonuclease inhibitor subtype. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.972 |
COLO4_06202 | COLO4_15660 | A0A1R3KNM2 | A0A1R3JLU1 | Leucine-rich repeat, ribonuclease inhibitor subtype. | Small ubiquitin-related modifier, SUMO. | 0.898 |
COLO4_06202 | COLO4_25994 | A0A1R3KNM2 | A0A1R3HZ54 | Leucine-rich repeat, ribonuclease inhibitor subtype. | SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. | 0.521 |
COLO4_06539 | COLO4_05189 | A0A1R3KMQ7 | A0A1R3KRK1 | UBA/THIF-type NAD/FAD binding protein. | Uncharacterized protein. | 0.456 |
COLO4_06539 | COLO4_06202 | A0A1R3KMQ7 | A0A1R3KNM2 | UBA/THIF-type NAD/FAD binding protein. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.592 |
COLO4_06539 | COLO4_08355 | A0A1R3KMQ7 | A0A1R3KGE0 | UBA/THIF-type NAD/FAD binding protein. | Zinc finger, MIZ-type. | 0.456 |
COLO4_06539 | COLO4_09095 | A0A1R3KMQ7 | A0A1R3KDB4 | UBA/THIF-type NAD/FAD binding protein. | Leucine-rich repeat, ribonuclease inhibitor subtype. | 0.592 |
COLO4_06539 | COLO4_10131 | A0A1R3KMQ7 | A0A1R3K9X1 | UBA/THIF-type NAD/FAD binding protein. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.986 |
COLO4_06539 | COLO4_11455 | A0A1R3KMQ7 | A0A1R3K4C2 | UBA/THIF-type NAD/FAD binding protein. | Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.986 |
COLO4_06539 | COLO4_15660 | A0A1R3KMQ7 | A0A1R3JLU1 | UBA/THIF-type NAD/FAD binding protein. | Small ubiquitin-related modifier, SUMO. | 0.968 |
COLO4_06539 | COLO4_19083 | A0A1R3KMQ7 | A0A1R3J6S1 | UBA/THIF-type NAD/FAD binding protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.485 |
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