Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_08752 | COLO4_15143 | A0A1R3KEN2 | A0A1R3JPC6 | Cytochrome P450; Belongs to the cytochrome P450 family. | CCHC-type domain-containing protein. | 0.845 |
COLO4_08752 | COLO4_25219 | A0A1R3KEN2 | A0A1R3I441 | Cytochrome P450; Belongs to the cytochrome P450 family. | Glutamine-Leucine-Glutamine, QLQ. | 0.650 |
COLO4_08752 | COLO4_26116 | A0A1R3KEN2 | A0A1R3HYJ3 | Cytochrome P450; Belongs to the cytochrome P450 family. | Glutaredoxin domain-containing protein. | 0.906 |
COLO4_08752 | COLO4_37598 | A0A1R3KEN2 | A0A1R3G0J2 | Cytochrome P450; Belongs to the cytochrome P450 family. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.928 |
COLO4_15143 | COLO4_08752 | A0A1R3JPC6 | A0A1R3KEN2 | CCHC-type domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.845 |
COLO4_15143 | COLO4_25219 | A0A1R3JPC6 | A0A1R3I441 | CCHC-type domain-containing protein. | Glutamine-Leucine-Glutamine, QLQ. | 0.790 |
COLO4_15143 | COLO4_25831 | A0A1R3JPC6 | A0A1R3HZX1 | CCHC-type domain-containing protein. | CaM_binding domain-containing protein. | 0.842 |
COLO4_15143 | COLO4_26116 | A0A1R3JPC6 | A0A1R3HYJ3 | CCHC-type domain-containing protein. | Glutaredoxin domain-containing protein. | 0.850 |
COLO4_15143 | COLO4_37598 | A0A1R3JPC6 | A0A1R3G0J2 | CCHC-type domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.850 |
COLO4_15143 | COLO4_37978 | A0A1R3JPC6 | A0A1R3FY03 | CCHC-type domain-containing protein. | DUF4371 domain-containing protein. | 0.740 |
COLO4_15143 | COLO4_38128 | A0A1R3JPC6 | A0A1R3FWU0 | CCHC-type domain-containing protein. | DUF4371 domain-containing protein. | 0.740 |
COLO4_15143 | COLO4_38284 | A0A1R3JPC6 | A0A1R3FVT3 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.740 |
COLO4_15143 | COLO4_38446 | A0A1R3JPC6 | A0A1R3FV76 | CCHC-type domain-containing protein. | Uncharacterized protein. | 0.740 |
COLO4_15143 | COLO4_38561 | A0A1R3JPC6 | A0A1R3FU92 | CCHC-type domain-containing protein. | Zinc finger, TTF-type. | 0.740 |
COLO4_25219 | COLO4_08752 | A0A1R3I441 | A0A1R3KEN2 | Glutamine-Leucine-Glutamine, QLQ. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.650 |
COLO4_25219 | COLO4_15143 | A0A1R3I441 | A0A1R3JPC6 | Glutamine-Leucine-Glutamine, QLQ. | CCHC-type domain-containing protein. | 0.790 |
COLO4_25219 | COLO4_25831 | A0A1R3I441 | A0A1R3HZX1 | Glutamine-Leucine-Glutamine, QLQ. | CaM_binding domain-containing protein. | 0.827 |
COLO4_25219 | COLO4_37598 | A0A1R3I441 | A0A1R3G0J2 | Glutamine-Leucine-Glutamine, QLQ. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.624 |
COLO4_25219 | COLO4_37978 | A0A1R3I441 | A0A1R3FY03 | Glutamine-Leucine-Glutamine, QLQ. | DUF4371 domain-containing protein. | 0.685 |
COLO4_25219 | COLO4_38128 | A0A1R3I441 | A0A1R3FWU0 | Glutamine-Leucine-Glutamine, QLQ. | DUF4371 domain-containing protein. | 0.685 |
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