Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_10987 | COLO4_12887 | A0A1R3K693 | A0A1R3JZC7 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
COLO4_10987 | COLO4_14499 | A0A1R3K693 | A0A1R3JRV0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
COLO4_10987 | COLO4_14588 | A0A1R3K693 | A0A1R3JRL2 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.767 |
COLO4_10987 | COLO4_22854 | A0A1R3K693 | A0A1R3IJF6 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
COLO4_10987 | COLO4_26906 | A0A1R3K693 | A0A1R3HU72 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.997 |
COLO4_10987 | COLO4_28678 | A0A1R3K693 | A0A1R3HIU3 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
COLO4_10987 | COLO4_34912 | A0A1R3K693 | A0A1R3GIU4 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
COLO4_10987 | COLO4_37344 | A0A1R3K693 | A0A1R3G297 | Uncharacterized protein. | BP28CT domain-containing protein. | 0.998 |
COLO4_10987 | COLO4_37813 | A0A1R3K693 | A0A1R3FZ30 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
COLO4_12887 | COLO4_10987 | A0A1R3JZC7 | A0A1R3K693 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.998 |
COLO4_12887 | COLO4_14499 | A0A1R3JZC7 | A0A1R3JRV0 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
COLO4_12887 | COLO4_14588 | A0A1R3JZC7 | A0A1R3JRL2 | WD_REPEATS_REGION domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.804 |
COLO4_12887 | COLO4_22854 | A0A1R3JZC7 | A0A1R3IJF6 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.996 |
COLO4_12887 | COLO4_26906 | A0A1R3JZC7 | A0A1R3HU72 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
COLO4_12887 | COLO4_28678 | A0A1R3JZC7 | A0A1R3HIU3 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
COLO4_12887 | COLO4_34912 | A0A1R3JZC7 | A0A1R3GIU4 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
COLO4_12887 | COLO4_37344 | A0A1R3JZC7 | A0A1R3G297 | WD_REPEATS_REGION domain-containing protein. | BP28CT domain-containing protein. | 0.999 |
COLO4_12887 | COLO4_37813 | A0A1R3JZC7 | A0A1R3FZ30 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
COLO4_14020 | COLO4_14588 | A0A1R3JUC9 | A0A1R3JRL2 | Tr-type G domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.679 |
COLO4_14020 | COLO4_28678 | A0A1R3JUC9 | A0A1R3HIU3 | Tr-type G domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.650 |
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