Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05264 | COLO4_14657 | A0A1R3KRC7 | A0A1R3JRS7 | UBX domain-containing protein. | Zinc finger, RING-CH-type. | 0.472 |
COLO4_05264 | COLO4_16250 | A0A1R3KRC7 | A0A1R3JIE5 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_05264 | COLO4_37860 | A0A1R3KRC7 | A0A1R3FYP7 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_10773 | COLO4_14657 | A0A1R3K6Z7 | A0A1R3JRS7 | UBX domain-containing protein. | Zinc finger, RING-CH-type. | 0.472 |
COLO4_10773 | COLO4_16250 | A0A1R3K6Z7 | A0A1R3JIE5 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_10773 | COLO4_37860 | A0A1R3K6Z7 | A0A1R3FYP7 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_12615 | COLO4_14657 | A0A1R3K0K8 | A0A1R3JRS7 | UBX domain-containing protein. | Zinc finger, RING-CH-type. | 0.472 |
COLO4_12615 | COLO4_16250 | A0A1R3K0K8 | A0A1R3JIE5 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_12615 | COLO4_37860 | A0A1R3K0K8 | A0A1R3FYP7 | UBX domain-containing protein. | Peptidylprolyl isomerase. | 0.633 |
COLO4_14657 | COLO4_05264 | A0A1R3JRS7 | A0A1R3KRC7 | Zinc finger, RING-CH-type. | UBX domain-containing protein. | 0.472 |
COLO4_14657 | COLO4_10773 | A0A1R3JRS7 | A0A1R3K6Z7 | Zinc finger, RING-CH-type. | UBX domain-containing protein. | 0.472 |
COLO4_14657 | COLO4_12615 | A0A1R3JRS7 | A0A1R3K0K8 | Zinc finger, RING-CH-type. | UBX domain-containing protein. | 0.472 |
COLO4_14657 | COLO4_16250 | A0A1R3JRS7 | A0A1R3JIE5 | Zinc finger, RING-CH-type. | Peptidylprolyl isomerase. | 0.464 |
COLO4_14657 | COLO4_18423 | A0A1R3JRS7 | A0A1R3J976 | Zinc finger, RING-CH-type. | NOT2 / NOT3 / NOT5 family protein. | 0.739 |
COLO4_14657 | COLO4_26510 | A0A1R3JRS7 | A0A1R3HWN5 | Zinc finger, RING-CH-type. | Thioredoxin. | 0.639 |
COLO4_14657 | COLO4_30107 | A0A1R3JRS7 | A0A1R3HB29 | Zinc finger, RING-CH-type. | UBX domain-containing protein. | 0.472 |
COLO4_14657 | COLO4_30874 | A0A1R3JRS7 | A0A1R3H6Q8 | Zinc finger, RING-CH-type. | Ubiquitin-conjugating enzyme, E2. | 0.464 |
COLO4_14657 | COLO4_30878 | A0A1R3JRS7 | A0A1R3H6N1 | Zinc finger, RING-CH-type. | Intron-encoded nuclease 2. | 0.464 |
COLO4_14657 | COLO4_37860 | A0A1R3JRS7 | A0A1R3FYP7 | Zinc finger, RING-CH-type. | Peptidylprolyl isomerase. | 0.464 |
COLO4_16250 | COLO4_05264 | A0A1R3JIE5 | A0A1R3KRC7 | Peptidylprolyl isomerase. | UBX domain-containing protein. | 0.633 |
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