Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_14399 | COLO4_18543 | A0A1R3JSL1 | A0A1R3J8T2 | Uncharacterized protein. | M-phase phosphoprotein 6. | 0.402 |
COLO4_14399 | COLO4_24904 | A0A1R3JSL1 | A0A1R3I5Z3 | Uncharacterized protein. | DNA-binding protein RHL1 isoform 1. | 0.682 |
COLO4_14399 | TOP6A | A0A1R3JSL1 | A0A1R3HTH1 | Uncharacterized protein. | DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.559 |
COLO4_14399 | TOP6B | A0A1R3JSL1 | A0A1R3KAP3 | Uncharacterized protein. | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | 0.692 |
COLO4_18543 | COLO4_14399 | A0A1R3J8T2 | A0A1R3JSL1 | M-phase phosphoprotein 6. | Uncharacterized protein. | 0.402 |
COLO4_24904 | COLO4_14399 | A0A1R3I5Z3 | A0A1R3JSL1 | DNA-binding protein RHL1 isoform 1. | Uncharacterized protein. | 0.682 |
COLO4_24904 | TOP6B | A0A1R3I5Z3 | A0A1R3KAP3 | DNA-binding protein RHL1 isoform 1. | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | 0.569 |
TOP6A | COLO4_14399 | A0A1R3HTH1 | A0A1R3JSL1 | DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | Uncharacterized protein. | 0.559 |
TOP6A | TOP6B | A0A1R3HTH1 | A0A1R3KAP3 | DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | 0.972 |
TOP6B | COLO4_14399 | A0A1R3KAP3 | A0A1R3JSL1 | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | Uncharacterized protein. | 0.692 |
TOP6B | COLO4_24904 | A0A1R3KAP3 | A0A1R3I5Z3 | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | DNA-binding protein RHL1 isoform 1. | 0.569 |
TOP6B | TOP6A | A0A1R3KAP3 | A0A1R3HTH1 | DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. | DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. | 0.972 |