Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05421 | COLO4_11028 | A0A1R3KQX4 | A0A1R3K616 | RRM domain-containing protein. | SPla/RYanodine receptor SPRY. | 0.952 |
COLO4_05421 | COLO4_14173 | A0A1R3KQX4 | A0A1R3JT62 | RRM domain-containing protein. | Uncharacterized protein. | 0.727 |
COLO4_05421 | COLO4_18047 | A0A1R3KQX4 | A0A1R3JAK2 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.855 |
COLO4_11028 | COLO4_05421 | A0A1R3K616 | A0A1R3KQX4 | SPla/RYanodine receptor SPRY. | RRM domain-containing protein. | 0.952 |
COLO4_11028 | COLO4_14173 | A0A1R3K616 | A0A1R3JT62 | SPla/RYanodine receptor SPRY. | Uncharacterized protein. | 0.746 |
COLO4_11028 | COLO4_18047 | A0A1R3K616 | A0A1R3JAK2 | SPla/RYanodine receptor SPRY. | Nuclear cap-binding protein subunit 2. | 0.802 |
COLO4_12025 | COLO4_14173 | A0A1R3K2F3 | A0A1R3JT62 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | Uncharacterized protein. | 0.672 |
COLO4_12025 | COLO4_25962 | A0A1R3K2F3 | A0A1R3HZ74 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. | 0.997 |
COLO4_12025 | COLO4_29445 | A0A1R3K2F3 | A0A1R3HEM3 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | Ribosomal protein S5/S7; Belongs to the universal ribosomal protein uS7 family. | 0.997 |
COLO4_12025 | COLO4_32536 | A0A1R3K2F3 | A0A1R3GZC6 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | Ribosomal protein S14. | 0.996 |
COLO4_12025 | COLO4_36514 | A0A1R3K2F3 | A0A1R3G8H8 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.969 |
COLO4_14173 | COLO4_05421 | A0A1R3JT62 | A0A1R3KQX4 | Uncharacterized protein. | RRM domain-containing protein. | 0.727 |
COLO4_14173 | COLO4_11028 | A0A1R3JT62 | A0A1R3K616 | Uncharacterized protein. | SPla/RYanodine receptor SPRY. | 0.746 |
COLO4_14173 | COLO4_12025 | A0A1R3JT62 | A0A1R3K2F3 | Uncharacterized protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.672 |
COLO4_14173 | COLO4_18047 | A0A1R3JT62 | A0A1R3JAK2 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.685 |
COLO4_14173 | COLO4_25962 | A0A1R3JT62 | A0A1R3HZ74 | Uncharacterized protein. | 40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. | 0.658 |
COLO4_14173 | COLO4_27286 | A0A1R3JT62 | A0A1R3HS17 | Uncharacterized protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.672 |
COLO4_14173 | COLO4_29445 | A0A1R3JT62 | A0A1R3HEM3 | Uncharacterized protein. | Ribosomal protein S5/S7; Belongs to the universal ribosomal protein uS7 family. | 0.652 |
COLO4_14173 | COLO4_32305 | A0A1R3JT62 | A0A1R3GZZ3 | Uncharacterized protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.672 |
COLO4_14173 | COLO4_32536 | A0A1R3JT62 | A0A1R3GZC6 | Uncharacterized protein. | Ribosomal protein S14. | 0.642 |
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