Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05101 | COLO4_06245 | A0A1R3KRY5 | A0A1R3KNJ8 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.991 |
COLO4_05101 | COLO4_07724 | A0A1R3KRY5 | A0A1R3KJ16 | Uncharacterized protein. | DNA-directed RNA polymerase, RBP11-like protein. | 0.996 |
COLO4_05101 | COLO4_12944 | A0A1R3KRY5 | A0A1R3JZ25 | Uncharacterized protein. | RNA polymerase Rpc34. | 0.998 |
COLO4_05101 | COLO4_14094 | A0A1R3KRY5 | A0A1R3JTJ2 | Uncharacterized protein. | RNA polymerase III Rpc4. | 0.986 |
COLO4_05101 | COLO4_14270 | A0A1R3KRY5 | A0A1R3JT94 | Uncharacterized protein. | RNA polymerase, subunit omega/K/RPABC2. | 0.996 |
COLO4_05101 | COLO4_14329 | A0A1R3KRY5 | A0A1R3JSP1 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
COLO4_05101 | COLO4_19069 | A0A1R3KRY5 | A0A1R3J6W4 | Uncharacterized protein. | DNA-directed RNA polymerase, RBP11-like protein. | 0.998 |
COLO4_05101 | COLO4_21559 | A0A1R3KRY5 | A0A1R3ISN7 | Uncharacterized protein. | RNA polymerase II, Rpb4. | 0.999 |
COLO4_05101 | COLO4_22111 | A0A1R3KRY5 | A0A1R3INZ8 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit Rpc5. | 0.991 |
COLO4_05101 | COLO4_24205 | A0A1R3KRY5 | A0A1R3IC48 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
COLO4_06245 | COLO4_05101 | A0A1R3KNJ8 | A0A1R3KRY5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.991 |
COLO4_06245 | COLO4_07724 | A0A1R3KNJ8 | A0A1R3KJ16 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase, RBP11-like protein. | 0.999 |
COLO4_06245 | COLO4_12944 | A0A1R3KNJ8 | A0A1R3JZ25 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase Rpc34. | 0.996 |
COLO4_06245 | COLO4_14094 | A0A1R3KNJ8 | A0A1R3JTJ2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase III Rpc4. | 0.986 |
COLO4_06245 | COLO4_14270 | A0A1R3KNJ8 | A0A1R3JT94 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase, subunit omega/K/RPABC2. | 0.999 |
COLO4_06245 | COLO4_14329 | A0A1R3KNJ8 | A0A1R3JSP1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
COLO4_06245 | COLO4_19069 | A0A1R3KNJ8 | A0A1R3J6W4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase, RBP11-like protein. | 0.995 |
COLO4_06245 | COLO4_21559 | A0A1R3KNJ8 | A0A1R3ISN7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RNA polymerase II, Rpb4. | 0.991 |
COLO4_06245 | COLO4_22111 | A0A1R3KNJ8 | A0A1R3INZ8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | DNA-directed RNA polymerase III subunit Rpc5. | 0.988 |
COLO4_06245 | COLO4_24205 | A0A1R3KNJ8 | A0A1R3IC48 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.999 |
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