Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05248 | COLO4_06057 | A0A1R3KRF5 | A0A1R3KP62 | Major intrinsic protein. | PRT_C domain-containing protein. | 0.551 |
COLO4_05248 | COLO4_09030 | A0A1R3KRF5 | A0A1R3KDH0 | Major intrinsic protein. | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | 0.597 |
COLO4_05248 | COLO4_13764 | A0A1R3KRF5 | A0A1R3JUW6 | Major intrinsic protein. | No apical meristem (NAM) protein. | 0.583 |
COLO4_05248 | COLO4_20824 | A0A1R3KRF5 | A0A1R3IWT4 | Major intrinsic protein. | Aconitate hydratase 2, mitochondrial. | 0.572 |
COLO4_05248 | COLO4_29180 | A0A1R3KRF5 | A0A1R3HFW0 | Major intrinsic protein. | Uncharacterized protein. | 0.611 |
COLO4_05248 | COLO4_29898 | A0A1R3KRF5 | A0A1R3HCM7 | Major intrinsic protein. | TF-B3 domain-containing protein. | 0.508 |
COLO4_05248 | COLO4_31007 | A0A1R3KRF5 | A0A1R3H638 | Major intrinsic protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.519 |
COLO4_05248 | COLO4_35092 | A0A1R3KRF5 | A0A1R3GIB4 | Major intrinsic protein. | Plastocyanin-like protein. | 0.547 |
COLO4_05248 | COLO4_35093 | A0A1R3KRF5 | A0A1R3GIE6 | Major intrinsic protein. | Plastocyanin-like protein. | 0.543 |
COLO4_05248 | COLO4_36498 | A0A1R3KRF5 | A0A1R3G8M7 | Major intrinsic protein. | BURP domain-containing protein. | 0.603 |
COLO4_06057 | COLO4_05248 | A0A1R3KP62 | A0A1R3KRF5 | PRT_C domain-containing protein. | Major intrinsic protein. | 0.551 |
COLO4_06057 | COLO4_09030 | A0A1R3KP62 | A0A1R3KDH0 | PRT_C domain-containing protein. | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | 0.594 |
COLO4_06057 | COLO4_13764 | A0A1R3KP62 | A0A1R3JUW6 | PRT_C domain-containing protein. | No apical meristem (NAM) protein. | 0.584 |
COLO4_06057 | COLO4_20824 | A0A1R3KP62 | A0A1R3IWT4 | PRT_C domain-containing protein. | Aconitate hydratase 2, mitochondrial. | 0.545 |
COLO4_06057 | COLO4_29180 | A0A1R3KP62 | A0A1R3HFW0 | PRT_C domain-containing protein. | Uncharacterized protein. | 0.596 |
COLO4_06057 | COLO4_29898 | A0A1R3KP62 | A0A1R3HCM7 | PRT_C domain-containing protein. | TF-B3 domain-containing protein. | 0.626 |
COLO4_06057 | COLO4_31007 | A0A1R3KP62 | A0A1R3H638 | PRT_C domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.616 |
COLO4_06057 | COLO4_35092 | A0A1R3KP62 | A0A1R3GIB4 | PRT_C domain-containing protein. | Plastocyanin-like protein. | 0.591 |
COLO4_06057 | COLO4_35093 | A0A1R3KP62 | A0A1R3GIE6 | PRT_C domain-containing protein. | Plastocyanin-like protein. | 0.593 |
COLO4_06057 | COLO4_36498 | A0A1R3KP62 | A0A1R3G8M7 | PRT_C domain-containing protein. | BURP domain-containing protein. | 0.601 |
page 1 of 6