STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_13538Putative phosphoprotein phosphatase. (608 aa)    
Predicted Functional Partners:
COLO4_06273
Importin N-terminal domain-containing protein.
   
 0.923
COLO4_20425
Importin N-terminal domain-containing protein.
   
 0.864
COLO4_16798
Importin N-terminal domain-containing protein.
   
 0.864
COLO4_14485
Importin N-terminal domain-containing protein.
   
 0.861
COLO4_36487
MIF4G-like, type 3.
   
 
 0.822
COLO4_18047
Nuclear cap-binding protein subunit 2.
    
 
 0.794
COLO4_29165
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.783
COLO4_28619
HRDC domain-containing protein.
    
   0.712
COLO4_27729
HRDC domain-containing protein.
    
   0.712
COLO4_05274
Uncharacterized protein.
   
 
 0.692
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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