STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_13623Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
COLO4_35946
Uncharacterized protein.
    
 0.919
COLO4_18693
NFACT-R_1 domain-containing protein.
    
 0.919
COLO4_22311
Exocyst complex component Sec10-like protein.
     
 0.677
COLO4_15385
Exocyst complex component Sec10-like protein.
     
 0.677
COLO4_26390
Sec3-PIP2_bind domain-containing protein.
     
 0.667
COLO4_12104
Uncharacterized protein.
    
 0.666
COLO4_34214
Putative exocyst complex component 4-like isoform 1 protein.
     
 0.589
COLO4_34215
Sec8_exocyst domain-containing protein.
     
 0.589
COLO4_16190
DDT domain-containing protein.
   
 
 0.557
COLO4_10514
Rad9/Ddc1; Belongs to the rad9 family.
   
 
 0.557
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.