Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04024 | COLO4_11556 | A0A1R3KVN1 | A0A1R3K445 | Methyltransferase. | N-acetyltransferase domain-containing protein. | 0.518 |
COLO4_04024 | COLO4_13106 | A0A1R3KVN1 | A0A1R3JY05 | Methyltransferase. | Transcription factor GRAS; Belongs to the GRAS family. | 0.519 |
COLO4_04024 | COLO4_13483 | A0A1R3KVN1 | A0A1R3JWE5 | Methyltransferase. | Uncharacterized protein. | 0.503 |
COLO4_04024 | COLO4_15627 | A0A1R3KVN1 | A0A1R3JLY0 | Methyltransferase. | No apical meristem (NAM) protein. | 0.510 |
COLO4_04024 | COLO4_17300 | A0A1R3KVN1 | A0A1R3JDG4 | Methyltransferase. | Armadillo. | 0.508 |
COLO4_04024 | COLO4_18534 | A0A1R3KVN1 | A0A1R3J8S4 | Methyltransferase. | Transcription factor GRAS; Belongs to the GRAS family. | 0.499 |
COLO4_04024 | COLO4_21899 | A0A1R3KVN1 | A0A1R3IQ24 | Methyltransferase. | Armadillo. | 0.519 |
COLO4_04024 | COLO4_29511 | A0A1R3KVN1 | A0A1R3HED2 | Methyltransferase. | FAS1 domain-containing protein. | 0.523 |
COLO4_04024 | COLO4_31409 | A0A1R3KVN1 | A0A1R3H4K7 | Methyltransferase. | No apical meristem (NAM) protein. | 0.466 |
COLO4_04024 | COLO4_31516 | A0A1R3KVN1 | A0A1R3H489 | Methyltransferase. | Uncharacterized protein. | 0.536 |
COLO4_11556 | COLO4_04024 | A0A1R3K445 | A0A1R3KVN1 | N-acetyltransferase domain-containing protein. | Methyltransferase. | 0.518 |
COLO4_11556 | COLO4_13106 | A0A1R3K445 | A0A1R3JY05 | N-acetyltransferase domain-containing protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.481 |
COLO4_11556 | COLO4_13483 | A0A1R3K445 | A0A1R3JWE5 | N-acetyltransferase domain-containing protein. | Uncharacterized protein. | 0.490 |
COLO4_11556 | COLO4_15627 | A0A1R3K445 | A0A1R3JLY0 | N-acetyltransferase domain-containing protein. | No apical meristem (NAM) protein. | 0.501 |
COLO4_11556 | COLO4_17300 | A0A1R3K445 | A0A1R3JDG4 | N-acetyltransferase domain-containing protein. | Armadillo. | 0.505 |
COLO4_11556 | COLO4_18534 | A0A1R3K445 | A0A1R3J8S4 | N-acetyltransferase domain-containing protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.506 |
COLO4_11556 | COLO4_21899 | A0A1R3K445 | A0A1R3IQ24 | N-acetyltransferase domain-containing protein. | Armadillo. | 0.499 |
COLO4_11556 | COLO4_29511 | A0A1R3K445 | A0A1R3HED2 | N-acetyltransferase domain-containing protein. | FAS1 domain-containing protein. | 0.481 |
COLO4_11556 | COLO4_31409 | A0A1R3K445 | A0A1R3H4K7 | N-acetyltransferase domain-containing protein. | No apical meristem (NAM) protein. | 0.491 |
COLO4_11556 | COLO4_31516 | A0A1R3K445 | A0A1R3H489 | N-acetyltransferase domain-containing protein. | Uncharacterized protein. | 0.522 |
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