Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_12680 | COLO4_13296 | A0A1R3K044 | A0A1R3JX09 | Uncharacterized protein; Belongs to the DEAD box helicase family. | GYF domain-containing protein. | 0.766 |
COLO4_13296 | COLO4_12680 | A0A1R3JX09 | A0A1R3K044 | GYF domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.766 |
COLO4_13296 | COLO4_14524 | A0A1R3JX09 | A0A1R3JS73 | GYF domain-containing protein. | DEAD-box ATP-dependent RNA helicase 8-like protein. | 0.766 |
COLO4_13296 | COLO4_16706 | A0A1R3JX09 | A0A1R3JFZ9 | GYF domain-containing protein. | Uncharacterized protein. | 0.512 |
COLO4_13296 | COLO4_21761 | A0A1R3JX09 | A0A1R3IRF3 | GYF domain-containing protein. | DEAD-box ATP-dependent RNA helicase 8. | 0.766 |
COLO4_13296 | COLO4_25493 | A0A1R3JX09 | A0A1R3I274 | GYF domain-containing protein. | Methyltransferase. | 0.512 |
COLO4_13296 | COLO4_36052 | A0A1R3JX09 | A0A1R3GB64 | GYF domain-containing protein. | Uncharacterized protein. | 0.512 |
COLO4_13296 | COLO4_36074 | A0A1R3JX09 | A0A1R3GB44 | GYF domain-containing protein. | Ribosomal protein L18/L5. | 0.512 |
COLO4_13296 | COLO4_36087 | A0A1R3JX09 | A0A1R3GB15 | GYF domain-containing protein. | Translation Initiation factor eIF-4e; Belongs to the eukaryotic initiation factor 4E family. | 0.851 |
COLO4_13296 | COLO4_36872 | A0A1R3JX09 | A0A1R3G4P8 | GYF domain-containing protein. | Methyltransferase. | 0.512 |
COLO4_13296 | COLO4_37128 | A0A1R3JX09 | A0A1R3G366 | GYF domain-containing protein. | Uncharacterized protein. | 0.512 |
COLO4_14524 | COLO4_13296 | A0A1R3JS73 | A0A1R3JX09 | DEAD-box ATP-dependent RNA helicase 8-like protein. | GYF domain-containing protein. | 0.766 |
COLO4_16706 | COLO4_13296 | A0A1R3JFZ9 | A0A1R3JX09 | Uncharacterized protein. | GYF domain-containing protein. | 0.512 |
COLO4_21761 | COLO4_13296 | A0A1R3IRF3 | A0A1R3JX09 | DEAD-box ATP-dependent RNA helicase 8. | GYF domain-containing protein. | 0.766 |
COLO4_25493 | COLO4_13296 | A0A1R3I274 | A0A1R3JX09 | Methyltransferase. | GYF domain-containing protein. | 0.512 |
COLO4_36052 | COLO4_13296 | A0A1R3GB64 | A0A1R3JX09 | Uncharacterized protein. | GYF domain-containing protein. | 0.512 |
COLO4_36074 | COLO4_13296 | A0A1R3GB44 | A0A1R3JX09 | Ribosomal protein L18/L5. | GYF domain-containing protein. | 0.512 |
COLO4_36087 | COLO4_13296 | A0A1R3GB15 | A0A1R3JX09 | Translation Initiation factor eIF-4e; Belongs to the eukaryotic initiation factor 4E family. | GYF domain-containing protein. | 0.851 |
COLO4_36872 | COLO4_13296 | A0A1R3G4P8 | A0A1R3JX09 | Methyltransferase. | GYF domain-containing protein. | 0.512 |
COLO4_37128 | COLO4_13296 | A0A1R3G366 | A0A1R3JX09 | Uncharacterized protein. | GYF domain-containing protein. | 0.512 |