STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_12587Plastocyanin-like protein. (209 aa)    
Predicted Functional Partners:
COLO4_05302
Zinc finger, DHHC-type, palmitoyltransferase.
  
     0.497
COLO4_03640
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.482
COLO4_25594
Uncharacterized protein.
  
     0.466
COLO4_30422
Late embryogenesis abundant protein, LEA-14.
  
     0.464
COLO4_11699
Lectin_legB domain-containing protein; Belongs to the leguminous lectin family.
  
     0.462
COLO4_22545
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.456
COLO4_34277
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.440
COLO4_11700
Lectin_legB domain-containing protein; Belongs to the leguminous lectin family.
  
     0.436
COLO4_08024
KIP1-like protein.
  
     0.429
COLO4_21706
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.422
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.