STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_12596D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. (254 aa)    
Predicted Functional Partners:
COLO4_06962
Ketose-bisphosphate aldolase, class-II.
  
 
 0.926
COLO4_07229
Aminotransferase, class V/Cysteine desulfurase.
  
 
 0.922
COLO4_28061
Malate synthase; Belongs to the malate synthase family.
  
 
 0.907
COLO4_00212
FMN-dependent dehydrogenase.
  
 
 0.894
COLO4_17406
FMN-dependent dehydrogenase.
  
 
 0.892
COLO4_24248
Aminotransferase, class I/classII.
    
 0.887
COLO4_36105
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.880
COLO4_25975
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.827
COLO4_32079
Phosphoglycolate phosphatase.
  
 
 0.825
COLO4_28587
HAD-superfamily hydrolase, subfamily IIA.
  
 
 0.825
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.