Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_08752 | COLO4_09187 | A0A1R3KEN2 | A0A1R3KCX4 | Cytochrome P450; Belongs to the cytochrome P450 family. | JmjC domain-containing protein. | 0.890 |
COLO4_08752 | COLO4_12463 | A0A1R3KEN2 | A0A1R3K0R1 | Cytochrome P450; Belongs to the cytochrome P450 family. | Peptidase M10, metallopeptidase. | 0.492 |
COLO4_08752 | COLO4_25219 | A0A1R3KEN2 | A0A1R3I441 | Cytochrome P450; Belongs to the cytochrome P450 family. | Glutamine-Leucine-Glutamine, QLQ. | 0.650 |
COLO4_08752 | COLO4_25220 | A0A1R3KEN2 | A0A1R3I432 | Cytochrome P450; Belongs to the cytochrome P450 family. | SnAC domain-containing protein. | 0.650 |
COLO4_09187 | COLO4_08752 | A0A1R3KCX4 | A0A1R3KEN2 | JmjC domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.890 |
COLO4_09187 | COLO4_12463 | A0A1R3KCX4 | A0A1R3K0R1 | JmjC domain-containing protein. | Peptidase M10, metallopeptidase. | 0.485 |
COLO4_09187 | COLO4_31135 | A0A1R3KCX4 | A0A1R3H5D3 | JmjC domain-containing protein. | Ubiquitin; Belongs to the membrane-bound acyltransferase family. | 0.902 |
COLO4_12463 | COLO4_08752 | A0A1R3K0R1 | A0A1R3KEN2 | Peptidase M10, metallopeptidase. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.492 |
COLO4_12463 | COLO4_09187 | A0A1R3K0R1 | A0A1R3KCX4 | Peptidase M10, metallopeptidase. | JmjC domain-containing protein. | 0.485 |
COLO4_12463 | COLO4_15462 | A0A1R3K0R1 | A0A1R3JN62 | Peptidase M10, metallopeptidase. | ASCH domain-containing protein. | 0.536 |
COLO4_12463 | COLO4_21132 | A0A1R3K0R1 | A0A1R3IV53 | Peptidase M10, metallopeptidase. | Stigma-specific protein Stig1. | 0.423 |
COLO4_12463 | COLO4_25219 | A0A1R3K0R1 | A0A1R3I441 | Peptidase M10, metallopeptidase. | Glutamine-Leucine-Glutamine, QLQ. | 0.523 |
COLO4_12463 | COLO4_25220 | A0A1R3K0R1 | A0A1R3I432 | Peptidase M10, metallopeptidase. | SnAC domain-containing protein. | 0.523 |
COLO4_12463 | COLO4_31135 | A0A1R3K0R1 | A0A1R3H5D3 | Peptidase M10, metallopeptidase. | Ubiquitin; Belongs to the membrane-bound acyltransferase family. | 0.497 |
COLO4_12463 | COLO4_31810 | A0A1R3K0R1 | A0A1R3H3D2 | Peptidase M10, metallopeptidase. | Stigma-specific protein Stig1. | 0.423 |
COLO4_12463 | COLO4_31812 | A0A1R3K0R1 | A0A1R3H3C6 | Peptidase M10, metallopeptidase. | Stigma-specific protein Stig1. | 0.423 |
COLO4_12463 | COLO4_31814 | A0A1R3K0R1 | A0A1R3H3G1 | Peptidase M10, metallopeptidase. | Stigma-specific protein Stig1. | 0.423 |
COLO4_15462 | COLO4_12463 | A0A1R3JN62 | A0A1R3K0R1 | ASCH domain-containing protein. | Peptidase M10, metallopeptidase. | 0.536 |
COLO4_15462 | COLO4_25219 | A0A1R3JN62 | A0A1R3I441 | ASCH domain-containing protein. | Glutamine-Leucine-Glutamine, QLQ. | 0.470 |
COLO4_15462 | COLO4_25220 | A0A1R3JN62 | A0A1R3I432 | ASCH domain-containing protein. | SnAC domain-containing protein. | 0.470 |
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