STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_12413Putative cop9 complex subunit 7a. (84 aa)    
Predicted Functional Partners:
COLO4_12614
PCI domain-containing protein.
   
 0.980
COLO4_26343
PCI domain-containing protein.
   
 0.979
COLO4_24925
PCI domain-containing protein.
    
 0.978
COLO4_19041
JAB1/Mov34/MPN/PAD-1.
    
 0.978
COLO4_08766
PCI domain-containing protein.
    
 0.977
COLO4_07504
COP9 signalosome, subunit CSN8.
    
 0.977
COLO4_31063
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.923
COLO4_31614
Putative eukaryotic translation initiation factor 3f, eif3f.
    
 0.888
COLO4_25650
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.888
COLO4_34663
JAB1/Mov34/MPN/PAD-1.
    
 0.874
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.