Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09073 | COLO4_09547 | A0A1R3KD82 | A0A1R3KBY4 | Uncharacterized protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.494 |
COLO4_09073 | COLO4_11412 | A0A1R3KD82 | A0A1R3K4L5 | Uncharacterized protein. | Ionotropic glutamate receptor. | 0.487 |
COLO4_09073 | COLO4_16193 | A0A1R3KD82 | A0A1R3JIT9 | Uncharacterized protein. | Allene oxide cyclase. | 0.541 |
COLO4_09073 | COLO4_21491 | A0A1R3KD82 | A0A1R3IT29 | Uncharacterized protein. | Uncharacterized protein. | 0.491 |
COLO4_09073 | COLO4_22869 | A0A1R3KD82 | A0A1R3IJP9 | Uncharacterized protein. | Uncharacterized protein. | 0.515 |
COLO4_09073 | COLO4_28780 | A0A1R3KD82 | A0A1R3HID9 | Uncharacterized protein. | Dimerisation domain-containing protein. | 0.419 |
COLO4_09073 | COLO4_31859 | A0A1R3KD82 | A0A1R3H350 | Uncharacterized protein. | Uncharacterized protein. | 0.453 |
COLO4_09073 | COLO4_32431 | A0A1R3KD82 | A0A1R3GZD3 | Uncharacterized protein. | Putative kinase. | 0.496 |
COLO4_09547 | COLO4_09073 | A0A1R3KBY4 | A0A1R3KD82 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.494 |
COLO4_09547 | COLO4_11412 | A0A1R3KBY4 | A0A1R3K4L5 | Transcription factor GRAS; Belongs to the GRAS family. | Ionotropic glutamate receptor. | 0.497 |
COLO4_09547 | COLO4_15289 | A0A1R3KBY4 | A0A1R3JNL6 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.469 |
COLO4_09547 | COLO4_16193 | A0A1R3KBY4 | A0A1R3JIT9 | Transcription factor GRAS; Belongs to the GRAS family. | Allene oxide cyclase. | 0.505 |
COLO4_09547 | COLO4_21491 | A0A1R3KBY4 | A0A1R3IT29 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.455 |
COLO4_09547 | COLO4_22869 | A0A1R3KBY4 | A0A1R3IJP9 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.425 |
COLO4_09547 | COLO4_24163 | A0A1R3KBY4 | A0A1R3ICC7 | Transcription factor GRAS; Belongs to the GRAS family. | Bulb-type lectin domain-containing protein. | 0.452 |
COLO4_09547 | COLO4_28780 | A0A1R3KBY4 | A0A1R3HID9 | Transcription factor GRAS; Belongs to the GRAS family. | Dimerisation domain-containing protein. | 0.442 |
COLO4_09547 | COLO4_32431 | A0A1R3KBY4 | A0A1R3GZD3 | Transcription factor GRAS; Belongs to the GRAS family. | Putative kinase. | 0.407 |
COLO4_11412 | COLO4_09073 | A0A1R3K4L5 | A0A1R3KD82 | Ionotropic glutamate receptor. | Uncharacterized protein. | 0.487 |
COLO4_11412 | COLO4_09547 | A0A1R3K4L5 | A0A1R3KBY4 | Ionotropic glutamate receptor. | Transcription factor GRAS; Belongs to the GRAS family. | 0.497 |
COLO4_11412 | COLO4_15289 | A0A1R3K4L5 | A0A1R3JNL6 | Ionotropic glutamate receptor. | Uncharacterized protein. | 0.471 |
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