Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_02805 | COLO4_11309 | A0A1R3L0E8 | A0A1R3K4W7 | Uncharacterized protein. | Serine/threonine-protein phosphatase PP1 isozyme 1. | 0.924 |
COLO4_02805 | COLO4_17684 | A0A1R3L0E8 | A0A1R3JBU8 | Uncharacterized protein. | Zinc finger, CCCH-type. | 0.999 |
COLO4_02805 | COLO4_21915 | A0A1R3L0E8 | A0A1R3IQ51 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
COLO4_02805 | COLO4_25753 | A0A1R3L0E8 | A0A1R3I071 | Uncharacterized protein. | Anaphase-promoting complex subunit 1. | 0.863 |
COLO4_02805 | COLO4_28055 | A0A1R3L0E8 | A0A1R3HN46 | Uncharacterized protein. | Cleavage and polyadenylation specificity factor subunit 2. | 0.994 |
COLO4_02805 | COLO4_28056 | A0A1R3L0E8 | A0A1R3HN23 | Uncharacterized protein. | Cleavage and polyadenylation specificity factor subunit 2. | 0.994 |
COLO4_02805 | COLO4_29099 | A0A1R3L0E8 | A0A1R3HGC6 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
COLO4_11309 | COLO4_02805 | A0A1R3K4W7 | A0A1R3L0E8 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Uncharacterized protein. | 0.924 |
COLO4_11309 | COLO4_13442 | A0A1R3K4W7 | A0A1R3JWI7 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Uncharacterized protein. | 0.895 |
COLO4_11309 | COLO4_16771 | A0A1R3K4W7 | A0A1R3JFM2 | Serine/threonine-protein phosphatase PP1 isozyme 1. | TAP42-like protein. | 0.879 |
COLO4_11309 | COLO4_17684 | A0A1R3K4W7 | A0A1R3JBU8 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Zinc finger, CCCH-type. | 0.976 |
COLO4_11309 | COLO4_21915 | A0A1R3K4W7 | A0A1R3IQ51 | Serine/threonine-protein phosphatase PP1 isozyme 1. | WD_REPEATS_REGION domain-containing protein. | 0.897 |
COLO4_11309 | COLO4_25753 | A0A1R3K4W7 | A0A1R3I071 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Anaphase-promoting complex subunit 1. | 0.864 |
COLO4_11309 | COLO4_28055 | A0A1R3K4W7 | A0A1R3HN46 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.849 |
COLO4_11309 | COLO4_28056 | A0A1R3K4W7 | A0A1R3HN23 | Serine/threonine-protein phosphatase PP1 isozyme 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.849 |
COLO4_11309 | COLO4_29099 | A0A1R3K4W7 | A0A1R3HGC6 | Serine/threonine-protein phosphatase PP1 isozyme 1. | WD_REPEATS_REGION domain-containing protein. | 0.897 |
COLO4_11309 | COLO4_34651 | A0A1R3K4W7 | A0A1R3GK13 | Serine/threonine-protein phosphatase PP1 isozyme 1. | SMK-1 domain-containing protein. | 0.879 |
COLO4_13442 | COLO4_11309 | A0A1R3JWI7 | A0A1R3K4W7 | Uncharacterized protein. | Serine/threonine-protein phosphatase PP1 isozyme 1. | 0.895 |
COLO4_13442 | COLO4_16771 | A0A1R3JWI7 | A0A1R3JFM2 | Uncharacterized protein. | TAP42-like protein. | 0.577 |
COLO4_13442 | COLO4_34651 | A0A1R3JWI7 | A0A1R3GK13 | Uncharacterized protein. | SMK-1 domain-containing protein. | 0.969 |
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