STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_11239Alpha/beta hydrolase-3. (456 aa)    
Predicted Functional Partners:
COLO4_32799
Uncharacterized protein.
    
 0.947
COLO4_29768
CAAX amino terminal protease.
     
 0.916
COLO4_12761
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.916
COLO4_20086
Protein-S-isoprenylcysteine O-methyltransferase.
     
 0.914
COLO4_11961
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
  0.898
COLO4_22089
Uncharacterized protein.
     
 0.891
COLO4_16217
Alpha/beta hydrolase-3.
  
  
 
0.888
COLO4_31773
tRNA transferase Trm5/Tyw2.
     
 0.729
COLO4_13628
Nop domain-containing protein.
   
  0.714
COLO4_35076
Ribosomal biogenesis, methyltransferase, EMG1/NEP1.
   
  0.713
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.