Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_06000 | COLO4_06601 | A0A1R3KPA7 | A0A1R3KMH6 | Uncharacterized protein. | Glutaredoxin domain-containing protein. | 0.661 |
COLO4_06000 | COLO4_10996 | A0A1R3KPA7 | A0A1R3K655 | Uncharacterized protein. | FeS cluster biogenesis. | 0.806 |
COLO4_06000 | COLO4_11645 | A0A1R3KPA7 | A0A1R3K3R6 | Uncharacterized protein. | Aminotransferase, class V/Cysteine desulfurase. | 0.904 |
COLO4_06000 | COLO4_19095 | A0A1R3KPA7 | A0A1R3J6S3 | Uncharacterized protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.694 |
COLO4_06000 | COLO4_23132 | A0A1R3KPA7 | A0A1R3II88 | Uncharacterized protein. | Uncharacterized protein. | 0.878 |
COLO4_06000 | COLO4_29517 | A0A1R3KPA7 | A0A1R3HE98 | Uncharacterized protein. | J domain-containing protein. | 0.583 |
COLO4_06000 | COLO4_29732 | A0A1R3KPA7 | A0A1R3HDH0 | Uncharacterized protein. | Uncharacterized protein. | 0.800 |
COLO4_06000 | COLO4_30054 | A0A1R3KPA7 | A0A1R3HBI5 | Uncharacterized protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.694 |
COLO4_06000 | COLO4_33261 | A0A1R3KPA7 | A0A1R3GVJ7 | Uncharacterized protein. | Aminotransferase, class V/Cysteine desulfurase. | 0.895 |
COLO4_06601 | COLO4_06000 | A0A1R3KMH6 | A0A1R3KPA7 | Glutaredoxin domain-containing protein. | Uncharacterized protein. | 0.661 |
COLO4_06601 | COLO4_10996 | A0A1R3KMH6 | A0A1R3K655 | Glutaredoxin domain-containing protein. | FeS cluster biogenesis. | 0.830 |
COLO4_06601 | COLO4_11645 | A0A1R3KMH6 | A0A1R3K3R6 | Glutaredoxin domain-containing protein. | Aminotransferase, class V/Cysteine desulfurase. | 0.590 |
COLO4_06601 | COLO4_17741 | A0A1R3KMH6 | A0A1R3JBK8 | Glutaredoxin domain-containing protein. | TF-B3 domain-containing protein. | 0.661 |
COLO4_06601 | COLO4_19095 | A0A1R3KMH6 | A0A1R3J6S3 | Glutaredoxin domain-containing protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.449 |
COLO4_06601 | COLO4_23132 | A0A1R3KMH6 | A0A1R3II88 | Glutaredoxin domain-containing protein. | Uncharacterized protein. | 0.443 |
COLO4_06601 | COLO4_29517 | A0A1R3KMH6 | A0A1R3HE98 | Glutaredoxin domain-containing protein. | J domain-containing protein. | 0.712 |
COLO4_06601 | COLO4_29732 | A0A1R3KMH6 | A0A1R3HDH0 | Glutaredoxin domain-containing protein. | Uncharacterized protein. | 0.797 |
COLO4_06601 | COLO4_30054 | A0A1R3KMH6 | A0A1R3HBI5 | Glutaredoxin domain-containing protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.449 |
COLO4_06601 | COLO4_33261 | A0A1R3KMH6 | A0A1R3GVJ7 | Glutaredoxin domain-containing protein. | Aminotransferase, class V/Cysteine desulfurase. | 0.598 |
COLO4_10996 | COLO4_06000 | A0A1R3K655 | A0A1R3KPA7 | FeS cluster biogenesis. | Uncharacterized protein. | 0.806 |
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