Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_03348 | COLO4_10692 | A0A1R3KYU2 | A0A1R3K7B1 | Endoglucanase. | Endoglucanase. | 0.853 |
COLO4_03348 | COLO4_16331 | A0A1R3KYU2 | A0A1R3JI51 | Endoglucanase. | Uncharacterized protein. | 0.893 |
COLO4_03348 | COLO4_19104 | A0A1R3KYU2 | A0A1R3J6P7 | Endoglucanase. | Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family. | 0.888 |
COLO4_03348 | COLO4_19105 | A0A1R3KYU2 | A0A1R3J6T4 | Endoglucanase. | Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family. | 0.888 |
COLO4_03348 | COLO4_25220 | A0A1R3KYU2 | A0A1R3I432 | Endoglucanase. | SnAC domain-containing protein. | 0.753 |
COLO4_03348 | COLO4_25348 | A0A1R3KYU2 | A0A1R3I3A7 | Endoglucanase. | Uncharacterized protein. | 0.888 |
COLO4_09446 | COLO4_10692 | A0A1R3KC77 | A0A1R3K7B1 | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | Endoglucanase. | 0.846 |
COLO4_09446 | COLO4_25220 | A0A1R3KC77 | A0A1R3I432 | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | SnAC domain-containing protein. | 0.416 |
COLO4_09446 | COLO4_27907 | A0A1R3KC77 | A0A1R3HNG0 | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | 0.831 |
COLO4_10692 | COLO4_03348 | A0A1R3K7B1 | A0A1R3KYU2 | Endoglucanase. | Endoglucanase. | 0.853 |
COLO4_10692 | COLO4_09446 | A0A1R3K7B1 | A0A1R3KC77 | Endoglucanase. | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | 0.846 |
COLO4_10692 | COLO4_13837 | A0A1R3K7B1 | A0A1R3JUN7 | Endoglucanase. | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | 0.846 |
COLO4_10692 | COLO4_16331 | A0A1R3K7B1 | A0A1R3JI51 | Endoglucanase. | Uncharacterized protein. | 0.890 |
COLO4_10692 | COLO4_19104 | A0A1R3K7B1 | A0A1R3J6P7 | Endoglucanase. | Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family. | 0.888 |
COLO4_10692 | COLO4_19105 | A0A1R3K7B1 | A0A1R3J6T4 | Endoglucanase. | Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family. | 0.888 |
COLO4_10692 | COLO4_25220 | A0A1R3K7B1 | A0A1R3I432 | Endoglucanase. | SnAC domain-containing protein. | 0.753 |
COLO4_10692 | COLO4_25348 | A0A1R3K7B1 | A0A1R3I3A7 | Endoglucanase. | Uncharacterized protein. | 0.884 |
COLO4_10692 | COLO4_27907 | A0A1R3K7B1 | A0A1R3HNG0 | Endoglucanase. | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | 0.880 |
COLO4_10692 | COLO4_31523 | A0A1R3K7B1 | A0A1R3H469 | Endoglucanase. | Uncharacterized protein. | 0.846 |
COLO4_13837 | COLO4_10692 | A0A1R3JUN7 | A0A1R3K7B1 | Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family. | Endoglucanase. | 0.846 |
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