STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_09925Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
COLO4_08340
Putative membrane-associated kinase regulator 2-like protein.
  
     0.525
COLO4_05068
Uncharacterized protein.
  
     0.520
COLO4_27878
Uncharacterized protein.
  
     0.490
COLO4_16099
Uncharacterized protein.
  
     0.480
COLO4_26453
Uncharacterized protein.
  
     0.473
COLO4_21307
Uncharacterized protein.
  
     0.463
COLO4_00526
Protein TRANSPARENT TESTA 12-like protein.
  
     0.457
COLO4_14867
ATP binding microtubule motor family protein.
  
     0.452
COLO4_33401
WAK_assoc domain-containing protein.
  
     0.451
COLO4_04933
Ribosomal protein L34Ae.
  
     0.449
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.