STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_09930Phosphoglycerate mutase 1. (344 aa)    
Predicted Functional Partners:
COLO4_06962
Ketose-bisphosphate aldolase, class-II.
   
 
 0.975
COLO4_26329
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.956
COLO4_19082
Enolase.
  
 0.952
COLO4_08659
Enolase.
  
 0.952
COLO4_28017
Transcription factor GRAS; Belongs to the GRAS family.
   
 0.948
COLO4_18514
Triosephosphate isomerase.
  
 0.945
COLO4_17254
Triosephosphate isomerase.
  
 0.941
COLO4_17255
Triosephosphate isomerase.
  
 0.941
COLO4_14178
Enolase.
  
 0.936
COLO4_37215
Transaldolase.
  
 0.932
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.