Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09164 | COLO4_09526 | A0A1R3KD66 | A0A1R3KBT4 | Uncharacterized protein. | BHLH domain-containing protein. | 0.466 |
COLO4_09164 | COLO4_10851 | A0A1R3KD66 | A0A1R3K6R2 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
COLO4_09164 | COLO4_16218 | A0A1R3KD66 | A0A1R3JIL5 | Uncharacterized protein. | Uncharacterized protein. | 0.443 |
COLO4_09164 | COLO4_24182 | A0A1R3KD66 | A0A1R3ICC6 | Uncharacterized protein. | Fibronectin, type III. | 0.420 |
COLO4_09526 | COLO4_09164 | A0A1R3KBT4 | A0A1R3KD66 | BHLH domain-containing protein. | Uncharacterized protein. | 0.466 |
COLO4_09526 | COLO4_10851 | A0A1R3KBT4 | A0A1R3K6R2 | BHLH domain-containing protein. | Uncharacterized protein. | 0.487 |
COLO4_09526 | COLO4_13034 | A0A1R3KBT4 | A0A1R3JYI3 | BHLH domain-containing protein. | NPH3 domain-containing protein; Belongs to the NPH3 family. | 0.438 |
COLO4_09526 | COLO4_15685 | A0A1R3KBT4 | A0A1R3JLK4 | BHLH domain-containing protein. | GTD-binding domain-containing protein. | 0.457 |
COLO4_09526 | COLO4_16218 | A0A1R3KBT4 | A0A1R3JIL5 | BHLH domain-containing protein. | Uncharacterized protein. | 0.479 |
COLO4_09526 | COLO4_20185 | A0A1R3KBT4 | A0A1R3J190 | BHLH domain-containing protein. | Uncharacterized protein. | 0.441 |
COLO4_09526 | COLO4_23938 | A0A1R3KBT4 | A0A1R3IE07 | BHLH domain-containing protein. | GTD-binding domain-containing protein. | 0.474 |
COLO4_09526 | COLO4_24182 | A0A1R3KBT4 | A0A1R3ICC6 | BHLH domain-containing protein. | Fibronectin, type III. | 0.493 |
COLO4_09526 | COLO4_29900 | A0A1R3KBT4 | A0A1R3HCL7 | BHLH domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.484 |
COLO4_09526 | COLO4_34901 | A0A1R3KBT4 | A0A1R3GJ46 | BHLH domain-containing protein. | FRIGIDA-like protein; Belongs to the Frigida family. | 0.444 |
COLO4_10851 | COLO4_09164 | A0A1R3K6R2 | A0A1R3KD66 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
COLO4_10851 | COLO4_09526 | A0A1R3K6R2 | A0A1R3KBT4 | Uncharacterized protein. | BHLH domain-containing protein. | 0.487 |
COLO4_10851 | COLO4_16218 | A0A1R3K6R2 | A0A1R3JIL5 | Uncharacterized protein. | Uncharacterized protein. | 0.446 |
COLO4_10851 | COLO4_20185 | A0A1R3K6R2 | A0A1R3J190 | Uncharacterized protein. | Uncharacterized protein. | 0.461 |
COLO4_10851 | COLO4_24182 | A0A1R3K6R2 | A0A1R3ICC6 | Uncharacterized protein. | Fibronectin, type III. | 0.487 |
COLO4_10851 | COLO4_29900 | A0A1R3K6R2 | A0A1R3HCL7 | Uncharacterized protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.466 |
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