Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_09423 | COLO4_11961 | A0A1R3KC55 | A0A1R3K2L8 | Uncharacterized protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.773 |
COLO4_09423 | COLO4_15470 | A0A1R3KC55 | A0A1R3JMZ3 | Uncharacterized protein. | Uncharacterized protein. | 0.870 |
COLO4_09423 | COLO4_17389 | A0A1R3KC55 | A0A1R3JCY5 | Uncharacterized protein. | ATPase, F1 complex, OSCP/delta subunit. | 0.771 |
COLO4_09423 | COLO4_19855 | A0A1R3KC55 | A0A1R3J2Z3 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.839 |
COLO4_09423 | COLO4_23037 | A0A1R3KC55 | A0A1R3IIN1 | Uncharacterized protein. | Pre-mRNA-processing factor 6/Prp1. | 0.763 |
COLO4_09423 | COLO4_23730 | A0A1R3KC55 | A0A1R3IF33 | Uncharacterized protein. | ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] | 0.799 |
COLO4_09423 | COLO4_23932 | A0A1R3KC55 | A0A1R3IE49 | Uncharacterized protein. | ATPase, F1 complex, OSCP/delta subunit. | 0.771 |
COLO4_09423 | COLO4_24795 | A0A1R3KC55 | A0A1R3I6S6 | Uncharacterized protein. | SPla/RYanodine receptor SPRY. | 0.771 |
COLO4_09423 | COLO4_29105 | A0A1R3KC55 | A0A1R3HGI1 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.807 |
COLO4_09423 | COLO4_31857 | A0A1R3KC55 | A0A1R3H312 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.839 |
COLO4_11961 | COLO4_09423 | A0A1R3K2L8 | A0A1R3KC55 | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | Uncharacterized protein. | 0.773 |
COLO4_15470 | COLO4_09423 | A0A1R3JMZ3 | A0A1R3KC55 | Uncharacterized protein. | Uncharacterized protein. | 0.870 |
COLO4_15470 | COLO4_19855 | A0A1R3JMZ3 | A0A1R3J2Z3 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.958 |
COLO4_15470 | COLO4_23037 | A0A1R3JMZ3 | A0A1R3IIN1 | Uncharacterized protein. | Pre-mRNA-processing factor 6/Prp1. | 0.541 |
COLO4_15470 | COLO4_31857 | A0A1R3JMZ3 | A0A1R3H312 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.958 |
COLO4_17389 | COLO4_09423 | A0A1R3JCY5 | A0A1R3KC55 | ATPase, F1 complex, OSCP/delta subunit. | Uncharacterized protein. | 0.771 |
COLO4_17389 | COLO4_19855 | A0A1R3JCY5 | A0A1R3J2Z3 | ATPase, F1 complex, OSCP/delta subunit. | Tr-type G domain-containing protein. | 0.650 |
COLO4_17389 | COLO4_23730 | A0A1R3JCY5 | A0A1R3IF33 | ATPase, F1 complex, OSCP/delta subunit. | ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] | 0.999 |
COLO4_17389 | COLO4_31857 | A0A1R3JCY5 | A0A1R3H312 | ATPase, F1 complex, OSCP/delta subunit. | Tr-type G domain-containing protein. | 0.650 |
COLO4_19855 | COLO4_09423 | A0A1R3J2Z3 | A0A1R3KC55 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.839 |
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