STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_09374Uncharacterized protein. (1214 aa)    
Predicted Functional Partners:
COLO4_25405
Serine/threonine-protein phosphatase.
   
 0.988
COLO4_08050
Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase.
   
 0.988
COLO4_08049
Metallophos domain-containing protein.
   
 0.988
COLO4_24570
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.
    
 0.955
COLO4_36262
Serine/threonine-protein phosphatase.
   
 0.948
COLO4_35007
Serine/threonine-protein phosphatase.
   
 0.948
COLO4_29394
Serine/threonine-protein phosphatase.
   
 0.948
COLO4_09743
Serine/threonine-protein phosphatase.
    
 0.939
COLO4_30613
Protein phosphatase 2A, regulatory subunit PR55.
    
 0.926
COLO4_30614
Protein phosphatase 2A, regulatory subunit PR55.
    
 0.926
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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