Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_08752 | COLO4_09187 | A0A1R3KEN2 | A0A1R3KCX4 | Cytochrome P450; Belongs to the cytochrome P450 family. | JmjC domain-containing protein. | 0.890 |
COLO4_09187 | COLO4_08752 | A0A1R3KCX4 | A0A1R3KEN2 | JmjC domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.890 |
COLO4_09187 | COLO4_18949 | A0A1R3KCX4 | A0A1R3J765 | JmjC domain-containing protein. | Phospholipase D/Transphosphatidylase. | 0.890 |
COLO4_09187 | COLO4_20874 | A0A1R3KCX4 | A0A1R3IWD1 | JmjC domain-containing protein. | Calcium-binding EF-hand. | 0.899 |
COLO4_09187 | COLO4_27714 | A0A1R3KCX4 | A0A1R3HPF7 | JmjC domain-containing protein. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.900 |
COLO4_09187 | COLO4_31135 | A0A1R3KCX4 | A0A1R3H5D3 | JmjC domain-containing protein. | Ubiquitin; Belongs to the membrane-bound acyltransferase family. | 0.902 |
COLO4_09187 | COLO4_32712 | A0A1R3KCX4 | A0A1R3GYJ4 | JmjC domain-containing protein. | Patatin/Phospholipase A2-related protein. | 0.890 |
COLO4_09187 | COLO4_33243 | A0A1R3KCX4 | A0A1R3GVL9 | JmjC domain-containing protein. | JmjC domain-containing protein. | 0.891 |
COLO4_09187 | COLO4_34869 | A0A1R3KCX4 | A0A1R3GJ41 | JmjC domain-containing protein. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.900 |
COLO4_09187 | COLO4_37146 | A0A1R3KCX4 | A0A1R3G352 | JmjC domain-containing protein. | Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. | 0.908 |
COLO4_09187 | COLO4_38548 | A0A1R3KCX4 | A0A1R3FUD1 | JmjC domain-containing protein. | Phosphatidyl serine synthase. | 0.889 |
COLO4_18949 | COLO4_09187 | A0A1R3J765 | A0A1R3KCX4 | Phospholipase D/Transphosphatidylase. | JmjC domain-containing protein. | 0.890 |
COLO4_20874 | COLO4_09187 | A0A1R3IWD1 | A0A1R3KCX4 | Calcium-binding EF-hand. | JmjC domain-containing protein. | 0.899 |
COLO4_20874 | COLO4_27714 | A0A1R3IWD1 | A0A1R3HPF7 | Calcium-binding EF-hand. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.936 |
COLO4_20874 | COLO4_31135 | A0A1R3IWD1 | A0A1R3H5D3 | Calcium-binding EF-hand. | Ubiquitin; Belongs to the membrane-bound acyltransferase family. | 0.946 |
COLO4_20874 | COLO4_32712 | A0A1R3IWD1 | A0A1R3GYJ4 | Calcium-binding EF-hand. | Patatin/Phospholipase A2-related protein. | 0.899 |
COLO4_20874 | COLO4_33243 | A0A1R3IWD1 | A0A1R3GVL9 | Calcium-binding EF-hand. | JmjC domain-containing protein. | 0.887 |
COLO4_20874 | COLO4_34869 | A0A1R3IWD1 | A0A1R3GJ41 | Calcium-binding EF-hand. | CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.936 |
COLO4_20874 | COLO4_37146 | A0A1R3IWD1 | A0A1R3G352 | Calcium-binding EF-hand. | Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily. | 0.993 |
COLO4_20874 | COLO4_38548 | A0A1R3IWD1 | A0A1R3FUD1 | Calcium-binding EF-hand. | Phosphatidyl serine synthase. | 0.938 |
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