Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_05488 | COLO4_08584 | A0A1R3KQT8 | A0A1R3KF84 | Phox/Bem1p. | Zinc finger, PMZ-type. | 0.535 |
COLO4_08584 | COLO4_05488 | A0A1R3KF84 | A0A1R3KQT8 | Zinc finger, PMZ-type. | Phox/Bem1p. | 0.535 |
COLO4_08584 | COLO4_10145 | A0A1R3KF84 | A0A1R3K9X2 | Zinc finger, PMZ-type. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.488 |
COLO4_08584 | COLO4_15874 | A0A1R3KF84 | A0A1R3JKW7 | Zinc finger, PMZ-type. | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | 0.756 |
COLO4_08584 | COLO4_19949 | A0A1R3KF84 | A0A1R3J2L0 | Zinc finger, PMZ-type. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.488 |
COLO4_08584 | COLO4_21821 | A0A1R3KF84 | A0A1R3IQK6 | Zinc finger, PMZ-type. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.733 |
COLO4_08584 | COLO4_23142 | A0A1R3KF84 | A0A1R3II41 | Zinc finger, PMZ-type. | Phox/Bem1p. | 0.506 |
COLO4_08584 | COLO4_23187 | A0A1R3KF84 | A0A1R3IHU6 | Zinc finger, PMZ-type. | SANT domain-containing protein. | 0.643 |
COLO4_08584 | COLO4_30162 | A0A1R3KF84 | A0A1R3HAU4 | Zinc finger, PMZ-type. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.488 |
COLO4_08584 | COLO4_34512 | A0A1R3KF84 | A0A1R3GKM0 | Zinc finger, PMZ-type. | Phox/Bem1p. | 0.495 |
COLO4_08584 | COLO4_38438 | A0A1R3KF84 | A0A1R3FV37 | Zinc finger, PMZ-type. | Actin-related protein; Belongs to the actin family. | 0.521 |
COLO4_10145 | COLO4_08584 | A0A1R3K9X2 | A0A1R3KF84 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Zinc finger, PMZ-type. | 0.488 |
COLO4_10145 | COLO4_15874 | A0A1R3K9X2 | A0A1R3JKW7 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | 0.590 |
COLO4_10145 | COLO4_21821 | A0A1R3K9X2 | A0A1R3IQK6 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.940 |
COLO4_15874 | COLO4_08584 | A0A1R3JKW7 | A0A1R3KF84 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | Zinc finger, PMZ-type. | 0.756 |
COLO4_15874 | COLO4_10145 | A0A1R3JKW7 | A0A1R3K9X2 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.590 |
COLO4_15874 | COLO4_19949 | A0A1R3JKW7 | A0A1R3J2L0 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.590 |
COLO4_15874 | COLO4_21821 | A0A1R3JKW7 | A0A1R3IQK6 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.999 |
COLO4_15874 | COLO4_23187 | A0A1R3JKW7 | A0A1R3IHU6 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | SANT domain-containing protein. | 0.986 |
COLO4_15874 | COLO4_30162 | A0A1R3JKW7 | A0A1R3HAU4 | Histone H4 acetyltransferase, NuA4 complex, Eaf6. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.590 |
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