Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04564 | COLO4_07999 | A0A1R3KTH8 | A0A1R3KHT3 | E3 ubiquitin-protein ligase PRT1-like protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.833 |
COLO4_04564 | COLO4_18091 | A0A1R3KTH8 | A0A1R3JAC4 | E3 ubiquitin-protein ligase PRT1-like protein. | Zinc finger, RING/FYVE/PHD-type. | 0.796 |
COLO4_04564 | COLO4_31122 | A0A1R3KTH8 | A0A1R3H5T0 | E3 ubiquitin-protein ligase PRT1-like protein. | Armadillo-like helical. | 0.513 |
COLO4_04564 | COLO4_31771 | A0A1R3KTH8 | A0A1R3H3I7 | E3 ubiquitin-protein ligase PRT1-like protein. | Zinc finger, RING/FYVE/PHD-type. | 0.796 |
COLO4_04990 | COLO4_07999 | A0A1R3KS70 | A0A1R3KHT3 | F-box domain-containing protein. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.874 |
COLO4_04990 | COLO4_18091 | A0A1R3KS70 | A0A1R3JAC4 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.756 |
COLO4_04990 | COLO4_19041 | A0A1R3KS70 | A0A1R3J780 | F-box domain-containing protein. | JAB1/Mov34/MPN/PAD-1. | 0.610 |
COLO4_04990 | COLO4_26343 | A0A1R3KS70 | A0A1R3HXY8 | F-box domain-containing protein. | PCI domain-containing protein. | 0.615 |
COLO4_04990 | COLO4_31122 | A0A1R3KS70 | A0A1R3H5T0 | F-box domain-containing protein. | Armadillo-like helical. | 0.723 |
COLO4_04990 | COLO4_31771 | A0A1R3KS70 | A0A1R3H3I7 | F-box domain-containing protein. | Zinc finger, RING/FYVE/PHD-type. | 0.756 |
COLO4_07999 | COLO4_04564 | A0A1R3KHT3 | A0A1R3KTH8 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | E3 ubiquitin-protein ligase PRT1-like protein. | 0.833 |
COLO4_07999 | COLO4_04990 | A0A1R3KHT3 | A0A1R3KS70 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | F-box domain-containing protein. | 0.874 |
COLO4_07999 | COLO4_10278 | A0A1R3KHT3 | A0A1R3K9E7 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Zinc finger, ZZ-type. | 0.833 |
COLO4_07999 | COLO4_12614 | A0A1R3KHT3 | A0A1R3K0B5 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | PCI domain-containing protein. | 0.872 |
COLO4_07999 | COLO4_18091 | A0A1R3KHT3 | A0A1R3JAC4 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Zinc finger, RING/FYVE/PHD-type. | 0.876 |
COLO4_07999 | COLO4_19041 | A0A1R3KHT3 | A0A1R3J780 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | JAB1/Mov34/MPN/PAD-1. | 0.874 |
COLO4_07999 | COLO4_24925 | A0A1R3KHT3 | A0A1R3I5U3 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | PCI domain-containing protein. | 0.848 |
COLO4_07999 | COLO4_26343 | A0A1R3KHT3 | A0A1R3HXY8 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | PCI domain-containing protein. | 0.843 |
COLO4_07999 | COLO4_31122 | A0A1R3KHT3 | A0A1R3H5T0 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Armadillo-like helical. | 0.928 |
COLO4_07999 | COLO4_31771 | A0A1R3KHT3 | A0A1R3H3I7 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Zinc finger, RING/FYVE/PHD-type. | 0.876 |
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