Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_07866 | COLO4_10666 | A0A1R3KIE6 | A0A1R3K7J1 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.440 |
COLO4_07866 | COLO4_10667 | A0A1R3KIE6 | A0A1R3K7A5 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.440 |
COLO4_07866 | COLO4_10668 | A0A1R3KIE6 | A0A1R3K793 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.440 |
COLO4_07866 | COLO4_10670 | A0A1R3KIE6 | A0A1R3K796 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.440 |
COLO4_07866 | COLO4_11124 | A0A1R3KIE6 | A0A1R3K5Y0 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.486 |
COLO4_07866 | COLO4_22721 | A0A1R3KIE6 | A0A1R3IKJ8 | NmrA-like protein. | NmrA-like protein. | 0.888 |
COLO4_07866 | COLO4_23801 | A0A1R3KIE6 | A0A1R3IEJ1 | NmrA-like protein. | Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.939 |
COLO4_07866 | COLO4_26275 | A0A1R3KIE6 | A0A1R3HXX5 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.927 |
COLO4_07866 | COLO4_26276 | A0A1R3KIE6 | A0A1R3HXW2 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.925 |
COLO4_07866 | COLO4_31680 | A0A1R3KIE6 | A0A1R3H3J0 | NmrA-like protein. | NAD-dependent epimerase/dehydratase. | 0.511 |
COLO4_10666 | COLO4_07866 | A0A1R3K7J1 | A0A1R3KIE6 | NAD-dependent epimerase/dehydratase. | NmrA-like protein. | 0.440 |
COLO4_10666 | COLO4_22721 | A0A1R3K7J1 | A0A1R3IKJ8 | NAD-dependent epimerase/dehydratase. | NmrA-like protein. | 0.440 |
COLO4_10666 | COLO4_23801 | A0A1R3K7J1 | A0A1R3IEJ1 | NAD-dependent epimerase/dehydratase. | Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.811 |
COLO4_10666 | COLO4_26275 | A0A1R3K7J1 | A0A1R3HXX5 | NAD-dependent epimerase/dehydratase. | NAD-dependent epimerase/dehydratase. | 0.413 |
COLO4_10666 | COLO4_31680 | A0A1R3K7J1 | A0A1R3H3J0 | NAD-dependent epimerase/dehydratase. | NAD-dependent epimerase/dehydratase. | 0.707 |
COLO4_10667 | COLO4_07866 | A0A1R3K7A5 | A0A1R3KIE6 | NAD-dependent epimerase/dehydratase. | NmrA-like protein. | 0.440 |
COLO4_10667 | COLO4_22721 | A0A1R3K7A5 | A0A1R3IKJ8 | NAD-dependent epimerase/dehydratase. | NmrA-like protein. | 0.440 |
COLO4_10667 | COLO4_23801 | A0A1R3K7A5 | A0A1R3IEJ1 | NAD-dependent epimerase/dehydratase. | Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.811 |
COLO4_10667 | COLO4_31680 | A0A1R3K7A5 | A0A1R3H3J0 | NAD-dependent epimerase/dehydratase. | NAD-dependent epimerase/dehydratase. | 0.694 |
COLO4_10668 | COLO4_07866 | A0A1R3K793 | A0A1R3KIE6 | NAD-dependent epimerase/dehydratase. | NmrA-like protein. | 0.440 |
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