STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_07766Raffinose synthase. (599 aa)    
Predicted Functional Partners:
COLO4_23208
Raffinose synthase.
  
  
0.894
COLO4_32799
Uncharacterized protein.
  
 
 0.893
COLO4_37217
Glycoside hydrolase, family 32; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.846
COLO4_14132
Glycoside hydrolase, family 32; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.846
COLO4_38454
Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
     
 0.823
COLO4_26842
Glycoside hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
     
 0.823
COLO4_34272
Glycosyl hydrolase, family 13, all-beta.
     
 0.631
COLO4_31525
Alpha-galactosidase.
     
 0.631
COLO4_19447
Alpha-galactosidase.
     
 0.631
COLO4_08313
Glycosyl hydrolase, family 13, all-beta; Belongs to the glycosyl hydrolase 27 family.
     
 0.631
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.