STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_07662GUN4-like protein. (189 aa)    
Predicted Functional Partners:
COLO4_19973
Chlorophyll synthase, chloroplastic-like isoform 1.
  
 
 0.628
COLO4_16780
Chlorophyll a oxygenase.
   
  
 0.617
COLO4_28282
CobN/magnesium chelatase.
   
  
 0.593
COLO4_37249
Mg-por_mtran_C domain-containing protein.
   
  
 0.577
COLO4_13659
Photosystem II Psp29, biogenesis.
  
  
 0.558
COLO4_07666
Uncharacterized protein.
    
 
 0.533
COLO4_35335
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
   
  
 0.532
COLO4_36486
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
      
 0.518
COLO4_23838
Uncharacterized protein.
  
     0.513
COLO4_27538
Heme oxygenase-like protein.
      
 0.499
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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