Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_07662 | COLO4_07666 | A0A1R3KJ02 | A0A1R3KIZ7 | GUN4-like protein. | Uncharacterized protein. | 0.533 |
COLO4_07662 | COLO4_13659 | A0A1R3KJ02 | A0A1R3JVQ0 | GUN4-like protein. | Photosystem II Psp29, biogenesis. | 0.558 |
COLO4_07662 | COLO4_16780 | A0A1R3KJ02 | A0A1R3JFK6 | GUN4-like protein. | Chlorophyll a oxygenase. | 0.617 |
COLO4_07662 | COLO4_19973 | A0A1R3KJ02 | A0A1R3J2H9 | GUN4-like protein. | Chlorophyll synthase, chloroplastic-like isoform 1. | 0.628 |
COLO4_07662 | COLO4_23838 | A0A1R3KJ02 | A0A1R3IEM3 | GUN4-like protein. | Uncharacterized protein. | 0.513 |
COLO4_07662 | COLO4_27538 | A0A1R3KJ02 | A0A1R3HQU0 | GUN4-like protein. | Heme oxygenase-like protein. | 0.499 |
COLO4_07662 | COLO4_28282 | A0A1R3KJ02 | A0A1R3HM02 | GUN4-like protein. | CobN/magnesium chelatase. | 0.593 |
COLO4_07662 | COLO4_35335 | A0A1R3KJ02 | A0A1R3GHH8 | GUN4-like protein. | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | 0.532 |
COLO4_07662 | COLO4_36486 | A0A1R3KJ02 | A0A1R3G8L9 | GUN4-like protein. | Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. | 0.518 |
COLO4_07662 | COLO4_37249 | A0A1R3KJ02 | A0A1R3G2R3 | GUN4-like protein. | Mg-por_mtran_C domain-containing protein. | 0.577 |
COLO4_07666 | COLO4_07662 | A0A1R3KIZ7 | A0A1R3KJ02 | Uncharacterized protein. | GUN4-like protein. | 0.533 |
COLO4_13659 | COLO4_07662 | A0A1R3JVQ0 | A0A1R3KJ02 | Photosystem II Psp29, biogenesis. | GUN4-like protein. | 0.558 |
COLO4_13659 | COLO4_19973 | A0A1R3JVQ0 | A0A1R3J2H9 | Photosystem II Psp29, biogenesis. | Chlorophyll synthase, chloroplastic-like isoform 1. | 0.426 |
COLO4_16780 | COLO4_07662 | A0A1R3JFK6 | A0A1R3KJ02 | Chlorophyll a oxygenase. | GUN4-like protein. | 0.617 |
COLO4_16780 | COLO4_19973 | A0A1R3JFK6 | A0A1R3J2H9 | Chlorophyll a oxygenase. | Chlorophyll synthase, chloroplastic-like isoform 1. | 0.933 |
COLO4_16780 | COLO4_28282 | A0A1R3JFK6 | A0A1R3HM02 | Chlorophyll a oxygenase. | CobN/magnesium chelatase. | 0.564 |
COLO4_16780 | COLO4_35335 | A0A1R3JFK6 | A0A1R3GHH8 | Chlorophyll a oxygenase. | Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. | 0.543 |
COLO4_16780 | COLO4_36486 | A0A1R3JFK6 | A0A1R3G8L9 | Chlorophyll a oxygenase. | Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. | 0.511 |
COLO4_16780 | COLO4_37249 | A0A1R3JFK6 | A0A1R3G2R3 | Chlorophyll a oxygenase. | Mg-por_mtran_C domain-containing protein. | 0.533 |
COLO4_19973 | COLO4_07662 | A0A1R3J2H9 | A0A1R3KJ02 | Chlorophyll synthase, chloroplastic-like isoform 1. | GUN4-like protein. | 0.628 |
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