Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04018 | COLO4_05427 | A0A1R3KVR3 | A0A1R3KR12 | Transcription factor GRAS; Belongs to the GRAS family. | No apical meristem (NAM) protein. | 0.402 |
COLO4_04018 | COLO4_06753 | A0A1R3KVR3 | A0A1R3KM27 | Transcription factor GRAS; Belongs to the GRAS family. | Myb-like domain-containing protein. | 0.499 |
COLO4_04018 | COLO4_15968 | A0A1R3KVR3 | A0A1R3JKL6 | Transcription factor GRAS; Belongs to the GRAS family. | Receptor-like protein 12-like protein. | 0.461 |
COLO4_04018 | COLO4_16699 | A0A1R3KVR3 | A0A1R3JFZ0 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.430 |
COLO4_04018 | COLO4_21107 | A0A1R3KVR3 | A0A1R3IV93 | Transcription factor GRAS; Belongs to the GRAS family. | DNA-binding WRKY. | 0.418 |
COLO4_05427 | COLO4_04018 | A0A1R3KR12 | A0A1R3KVR3 | No apical meristem (NAM) protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.402 |
COLO4_05427 | COLO4_06753 | A0A1R3KR12 | A0A1R3KM27 | No apical meristem (NAM) protein. | Myb-like domain-containing protein. | 0.510 |
COLO4_05427 | COLO4_15968 | A0A1R3KR12 | A0A1R3JKL6 | No apical meristem (NAM) protein. | Receptor-like protein 12-like protein. | 0.471 |
COLO4_05427 | COLO4_16699 | A0A1R3KR12 | A0A1R3JFZ0 | No apical meristem (NAM) protein. | Uncharacterized protein. | 0.516 |
COLO4_05427 | COLO4_19598 | A0A1R3KR12 | A0A1R3J4P2 | No apical meristem (NAM) protein. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.443 |
COLO4_05427 | COLO4_21107 | A0A1R3KR12 | A0A1R3IV93 | No apical meristem (NAM) protein. | DNA-binding WRKY. | 0.510 |
COLO4_05427 | COLO4_29569 | A0A1R3KR12 | A0A1R3HE69 | No apical meristem (NAM) protein. | BTB domain-containing protein. | 0.411 |
COLO4_06753 | COLO4_04018 | A0A1R3KM27 | A0A1R3KVR3 | Myb-like domain-containing protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.499 |
COLO4_06753 | COLO4_05427 | A0A1R3KM27 | A0A1R3KR12 | Myb-like domain-containing protein. | No apical meristem (NAM) protein. | 0.510 |
COLO4_06753 | COLO4_13316 | A0A1R3KM27 | A0A1R3JX12 | Myb-like domain-containing protein. | No apical meristem (NAM) protein. | 0.514 |
COLO4_06753 | COLO4_13902 | A0A1R3KM27 | A0A1R3JU95 | Myb-like domain-containing protein. | SANT domain-containing protein. | 0.647 |
COLO4_06753 | COLO4_15968 | A0A1R3KM27 | A0A1R3JKL6 | Myb-like domain-containing protein. | Receptor-like protein 12-like protein. | 0.508 |
COLO4_06753 | COLO4_16699 | A0A1R3KM27 | A0A1R3JFZ0 | Myb-like domain-containing protein. | Uncharacterized protein. | 0.543 |
COLO4_06753 | COLO4_19598 | A0A1R3KM27 | A0A1R3J4P2 | Myb-like domain-containing protein. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.495 |
COLO4_06753 | COLO4_21107 | A0A1R3KM27 | A0A1R3IV93 | Myb-like domain-containing protein. | DNA-binding WRKY. | 0.516 |
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