Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_06415 | COLO4_06475 | A0A1R3KN25 | A0A1R3KN61 | Uncharacterized protein. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.402 |
COLO4_06415 | COLO4_08018 | A0A1R3KN25 | A0A1R3KHT6 | Uncharacterized protein. | rRNA processing. | 0.456 |
COLO4_06415 | COLO4_09559 | A0A1R3KN25 | A0A1R3KBQ9 | Uncharacterized protein. | DUF1995 domain-containing protein. | 0.483 |
COLO4_06415 | COLO4_12298 | A0A1R3KN25 | A0A1R3K1L0 | Uncharacterized protein. | Photosystem II PsbP, oxygen evolving complex. | 0.409 |
COLO4_06415 | COLO4_15424 | A0A1R3KN25 | A0A1R3JNE0 | Uncharacterized protein. | Uncharacterized protein. | 0.417 |
COLO4_06415 | COLO4_16510 | A0A1R3KN25 | A0A1R3JH50 | Uncharacterized protein. | UV radiation resistance protein/autophagy-related protein 14. | 0.430 |
COLO4_06415 | COLO4_18973 | A0A1R3KN25 | A0A1R3J733 | Uncharacterized protein. | SKA2 domain-containing protein. | 0.400 |
COLO4_06415 | COLO4_20404 | A0A1R3KN25 | A0A1R3J002 | Uncharacterized protein. | Uncharacterized protein. | 0.503 |
COLO4_06415 | COLO4_31320 | A0A1R3KN25 | A0A1R3H4S6 | Uncharacterized protein. | Ribosomal protein L34. | 0.429 |
COLO4_06475 | COLO4_06415 | A0A1R3KN61 | A0A1R3KN25 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Uncharacterized protein. | 0.402 |
COLO4_06475 | COLO4_08018 | A0A1R3KN61 | A0A1R3KHT6 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | rRNA processing. | 0.408 |
COLO4_06475 | COLO4_09559 | A0A1R3KN61 | A0A1R3KBQ9 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | DUF1995 domain-containing protein. | 0.496 |
COLO4_06475 | COLO4_16510 | A0A1R3KN61 | A0A1R3JH50 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | UV radiation resistance protein/autophagy-related protein 14. | 0.492 |
COLO4_06475 | COLO4_31320 | A0A1R3KN61 | A0A1R3H4S6 | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | Ribosomal protein L34. | 0.472 |
COLO4_08018 | COLO4_06415 | A0A1R3KHT6 | A0A1R3KN25 | rRNA processing. | Uncharacterized protein. | 0.456 |
COLO4_08018 | COLO4_06475 | A0A1R3KHT6 | A0A1R3KN61 | rRNA processing. | Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. | 0.408 |
COLO4_08018 | COLO4_09559 | A0A1R3KHT6 | A0A1R3KBQ9 | rRNA processing. | DUF1995 domain-containing protein. | 0.457 |
COLO4_08018 | COLO4_18973 | A0A1R3KHT6 | A0A1R3J733 | rRNA processing. | SKA2 domain-containing protein. | 0.436 |
COLO4_08018 | COLO4_20404 | A0A1R3KHT6 | A0A1R3J002 | rRNA processing. | Uncharacterized protein. | 0.457 |
COLO4_08018 | COLO4_31320 | A0A1R3KHT6 | A0A1R3H4S6 | rRNA processing. | Ribosomal protein L34. | 0.402 |
page 1 of 3