Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04781 | COLO4_04876 | A0A1R3KSS9 | A0A1R3KSP6 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Amine oxidase. | 0.873 |
COLO4_04781 | COLO4_04877 | A0A1R3KSS9 | A0A1R3KSN4 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Amine oxidase. | 0.873 |
COLO4_04781 | COLO4_05574 | A0A1R3KSS9 | A0A1R3KQN3 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Amine oxidase. | 0.901 |
COLO4_04781 | COLO4_12105 | A0A1R3KSS9 | A0A1R3K249 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.837 |
COLO4_04781 | COLO4_18200 | A0A1R3KSS9 | A0A1R3JA41 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Amine oxidase. | 0.891 |
COLO4_04781 | COLO4_21980 | A0A1R3KSS9 | A0A1R3IPW1 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.637 |
COLO4_04781 | COLO4_24894 | A0A1R3KSS9 | A0A1R3I637 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.636 |
COLO4_04781 | COLO4_25975 | A0A1R3KSS9 | A0A1R3HZ38 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.794 |
COLO4_04781 | COLO4_29896 | A0A1R3KSS9 | A0A1R3HCN4 | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | Flavin amine oxidase. | 0.860 |
COLO4_04876 | COLO4_04781 | A0A1R3KSP6 | A0A1R3KSS9 | Amine oxidase. | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | 0.873 |
COLO4_04876 | COLO4_04877 | A0A1R3KSP6 | A0A1R3KSN4 | Amine oxidase. | Amine oxidase. | 0.883 |
COLO4_04876 | COLO4_05574 | A0A1R3KSP6 | A0A1R3KQN3 | Amine oxidase. | Amine oxidase. | 0.898 |
COLO4_04876 | COLO4_12105 | A0A1R3KSP6 | A0A1R3K249 | Amine oxidase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.894 |
COLO4_04876 | COLO4_18200 | A0A1R3KSP6 | A0A1R3JA41 | Amine oxidase. | Amine oxidase. | 0.895 |
COLO4_04876 | COLO4_21980 | A0A1R3KSP6 | A0A1R3IPW1 | Amine oxidase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.880 |
COLO4_04876 | COLO4_24894 | A0A1R3KSP6 | A0A1R3I637 | Amine oxidase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.881 |
COLO4_04876 | COLO4_29896 | A0A1R3KSP6 | A0A1R3HCN4 | Amine oxidase. | Flavin amine oxidase. | 0.892 |
COLO4_04877 | COLO4_04781 | A0A1R3KSN4 | A0A1R3KSS9 | Amine oxidase. | Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. | 0.873 |
COLO4_04877 | COLO4_04876 | A0A1R3KSN4 | A0A1R3KSP6 | Amine oxidase. | Amine oxidase. | 0.883 |
COLO4_04877 | COLO4_05574 | A0A1R3KSN4 | A0A1R3KQN3 | Amine oxidase. | Amine oxidase. | 0.898 |
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