STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_04921Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
COLO4_19524
AP-1 complex subunit gamma.
    
 0.961
COLO4_16747
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
    
 0.961
COLO4_34497
Uncharacterized protein.
    
 0.940
COLO4_26308
Ribosomal protein L27.
    
 0.940
COLO4_18700
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.940
COLO4_35219
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.863
COLO4_30150
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.863
COLO4_30151
Uncharacterized protein.
    
 0.863
COLO4_28661
Uncharacterized protein.
    
 0.863
COLO4_26250
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.863
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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