Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04581 | COLO4_06330 | A0A1R3KTE1 | A0A1R3KNC3 | Uncharacterized protein. | Uncharacterized protein. | 0.527 |
COLO4_04581 | COLO4_07687 | A0A1R3KTE1 | A0A1R3KJ56 | Uncharacterized protein. | Uncharacterized protein. | 0.525 |
COLO4_04581 | COLO4_09590 | A0A1R3KTE1 | A0A1R3KBL6 | Uncharacterized protein. | Plastocyanin-like protein. | 0.526 |
COLO4_04581 | COLO4_18685 | A0A1R3KTE1 | A0A1R3J879 | Uncharacterized protein. | Uncharacterized protein. | 0.527 |
COLO4_04581 | COLO4_21513 | A0A1R3KTE1 | A0A1R3ISW4 | Uncharacterized protein. | Plant lipid transfer protein/Par allergen; Belongs to the plant LTP family. | 0.563 |
COLO4_04581 | COLO4_22162 | A0A1R3KTE1 | A0A1R3INQ8 | Uncharacterized protein. | Uncharacterized protein. | 0.576 |
COLO4_04581 | COLO4_28017 | A0A1R3KTE1 | A0A1R3HNA6 | Uncharacterized protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.646 |
COLO4_04581 | COLO4_29898 | A0A1R3KTE1 | A0A1R3HCM7 | Uncharacterized protein. | TF-B3 domain-containing protein. | 0.575 |
COLO4_04581 | COLO4_31007 | A0A1R3KTE1 | A0A1R3H638 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.570 |
COLO4_04581 | COLO4_34256 | A0A1R3KTE1 | A0A1R3GML2 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.869 |
COLO4_06330 | COLO4_04581 | A0A1R3KNC3 | A0A1R3KTE1 | Uncharacterized protein. | Uncharacterized protein. | 0.527 |
COLO4_06330 | COLO4_07687 | A0A1R3KNC3 | A0A1R3KJ56 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
COLO4_06330 | COLO4_09590 | A0A1R3KNC3 | A0A1R3KBL6 | Uncharacterized protein. | Plastocyanin-like protein. | 0.502 |
COLO4_06330 | COLO4_18685 | A0A1R3KNC3 | A0A1R3J879 | Uncharacterized protein. | Uncharacterized protein. | 0.526 |
COLO4_06330 | COLO4_21513 | A0A1R3KNC3 | A0A1R3ISW4 | Uncharacterized protein. | Plant lipid transfer protein/Par allergen; Belongs to the plant LTP family. | 0.465 |
COLO4_06330 | COLO4_29898 | A0A1R3KNC3 | A0A1R3HCM7 | Uncharacterized protein. | TF-B3 domain-containing protein. | 0.472 |
COLO4_06330 | COLO4_31007 | A0A1R3KNC3 | A0A1R3H638 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.499 |
COLO4_07687 | COLO4_04581 | A0A1R3KJ56 | A0A1R3KTE1 | Uncharacterized protein. | Uncharacterized protein. | 0.525 |
COLO4_07687 | COLO4_06330 | A0A1R3KJ56 | A0A1R3KNC3 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
COLO4_07687 | COLO4_09590 | A0A1R3KJ56 | A0A1R3KBL6 | Uncharacterized protein. | Plastocyanin-like protein. | 0.482 |
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