STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_04126Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (129 aa)    
Predicted Functional Partners:
COLO4_12350
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
0.991
COLO4_05729
GRIM-19 protein.
   
 0.989
COLO4_25307
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.988
COLO4_05967
NADH-ubiquinone oxidoreductase, subunit 10.
   
 0.988
ndhJ
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
 0.985
COLO4_02902
Epimerase domain-containing protein.
   
 0.985
COLO4_26046
Uncharacterized protein.
   
 0.984
COLO4_26045
Complex 1 LYR protein; Belongs to the complex I LYR family.
   
 0.984
COLO4_25931
Uncharacterized protein.
   
 0.984
COLO4_05232
Uncharacterized protein.
   
 0.981
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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