Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_04116 | COLO4_13558 | A0A1R3KV92 | A0A1R3JWH0 | Pseudouridine-5'-phosphate glycosidase. | Uncharacterized protein. | 0.864 |
COLO4_04116 | COLO4_14757 | A0A1R3KV92 | A0A1R3JQX7 | Pseudouridine-5'-phosphate glycosidase. | Vacuolar import/degradation protein Vid24. | 0.864 |
COLO4_04116 | COLO4_15224 | A0A1R3KV92 | A0A1R3JNX9 | Pseudouridine-5'-phosphate glycosidase. | PNP_UDP_1 domain-containing protein. | 0.739 |
COLO4_04116 | COLO4_18213 | A0A1R3KV92 | A0A1R3J9V0 | Pseudouridine-5'-phosphate glycosidase. | CMP/dCMP deaminase, zinc-binding protein. | 0.874 |
COLO4_04116 | COLO4_18669 | A0A1R3KV92 | A0A1R3J8A9 | Pseudouridine-5'-phosphate glycosidase. | PNP_UDP_1 domain-containing protein. | 0.739 |
COLO4_04116 | COLO4_18670 | A0A1R3KV92 | A0A1R3J8D3 | Pseudouridine-5'-phosphate glycosidase. | PNP_UDP_1 domain-containing protein. | 0.739 |
COLO4_04116 | COLO4_20794 | A0A1R3KV92 | A0A1R3IX05 | Pseudouridine-5'-phosphate glycosidase. | PNP_UDP_1 domain-containing protein. | 0.739 |
COLO4_04116 | COLO4_29777 | A0A1R3KV92 | A0A1R3HDB6 | Pseudouridine-5'-phosphate glycosidase. | IU_nuc_hydro domain-containing protein. | 0.901 |
COLO4_04116 | COLO4_33098 | A0A1R3KV92 | A0A1R3GWA9 | Pseudouridine-5'-phosphate glycosidase. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.893 |
COLO4_04116 | COLO4_34814 | A0A1R3KV92 | A0A1R3GJJ5 | Pseudouridine-5'-phosphate glycosidase. | PNP_UDP_1 domain-containing protein. | 0.739 |
COLO4_13558 | COLO4_04116 | A0A1R3JWH0 | A0A1R3KV92 | Uncharacterized protein. | Pseudouridine-5'-phosphate glycosidase. | 0.864 |
COLO4_13558 | COLO4_15224 | A0A1R3JWH0 | A0A1R3JNX9 | Uncharacterized protein. | PNP_UDP_1 domain-containing protein. | 0.600 |
COLO4_13558 | COLO4_18213 | A0A1R3JWH0 | A0A1R3J9V0 | Uncharacterized protein. | CMP/dCMP deaminase, zinc-binding protein. | 0.923 |
COLO4_13558 | COLO4_18669 | A0A1R3JWH0 | A0A1R3J8A9 | Uncharacterized protein. | PNP_UDP_1 domain-containing protein. | 0.600 |
COLO4_13558 | COLO4_18670 | A0A1R3JWH0 | A0A1R3J8D3 | Uncharacterized protein. | PNP_UDP_1 domain-containing protein. | 0.600 |
COLO4_13558 | COLO4_20794 | A0A1R3JWH0 | A0A1R3IX05 | Uncharacterized protein. | PNP_UDP_1 domain-containing protein. | 0.600 |
COLO4_13558 | COLO4_33098 | A0A1R3JWH0 | A0A1R3GWA9 | Uncharacterized protein. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.903 |
COLO4_13558 | COLO4_34814 | A0A1R3JWH0 | A0A1R3GJJ5 | Uncharacterized protein. | PNP_UDP_1 domain-containing protein. | 0.600 |
COLO4_14757 | COLO4_04116 | A0A1R3JQX7 | A0A1R3KV92 | Vacuolar import/degradation protein Vid24. | Pseudouridine-5'-phosphate glycosidase. | 0.864 |
COLO4_14757 | COLO4_15224 | A0A1R3JQX7 | A0A1R3JNX9 | Vacuolar import/degradation protein Vid24. | PNP_UDP_1 domain-containing protein. | 0.600 |
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