Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_03377 | COLO4_25352 | A0A1R3KYR2 | A0A1R3I3G2 | Cohesin subunit SA-1-like protein. | RecF/RecN/SMC. | 0.408 |
COLO4_03377 | COLO4_33309 | A0A1R3KYR2 | A0A1R3GUT3 | Cohesin subunit SA-1-like protein. | Structural maintenance of chromosomes protein. | 0.408 |
COLO4_03377 | COLO4_34797 | A0A1R3KYR2 | A0A1R3GJH1 | Cohesin subunit SA-1-like protein. | Uncharacterized protein. | 0.540 |
COLO4_25352 | COLO4_03377 | A0A1R3I3G2 | A0A1R3KYR2 | RecF/RecN/SMC. | Cohesin subunit SA-1-like protein. | 0.408 |
COLO4_25352 | COLO4_33309 | A0A1R3I3G2 | A0A1R3GUT3 | RecF/RecN/SMC. | Structural maintenance of chromosomes protein. | 0.836 |
COLO4_33309 | COLO4_03377 | A0A1R3GUT3 | A0A1R3KYR2 | Structural maintenance of chromosomes protein. | Cohesin subunit SA-1-like protein. | 0.408 |
COLO4_33309 | COLO4_25352 | A0A1R3GUT3 | A0A1R3I3G2 | Structural maintenance of chromosomes protein. | RecF/RecN/SMC. | 0.836 |
COLO4_34797 | COLO4_03377 | A0A1R3GJH1 | A0A1R3KYR2 | Uncharacterized protein. | Cohesin subunit SA-1-like protein. | 0.540 |