STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLO4_02682ATP-synt_ab_N domain-containing protein. (136 aa)    
Predicted Functional Partners:
COLO4_23730
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 0.963
COLO4_23932
ATPase, F1 complex, OSCP/delta subunit.
  
 0.955
COLO4_17389
ATPase, F1 complex, OSCP/delta subunit.
  
 0.955
COLO4_31778
ATPase, F1 complex, gamma subunit.
 
 0.898
COLO4_06862
ATPase, F1 complex, gamma subunit.
 
 0.879
COLO4_07982
ATPase, F1 complex, gamma subunit.
  
 0.877
COLO4_14818
Uncharacterized protein.
    
 0.874
COLO4_13992
ATPase, F1 complex, epsilon subunit, mitochondrial.
    
 0.874
atpH
ATP synthase subunit c, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.845
COLO4_22782
UBA-like protein.
  
 0.842
Your Current Organism:
Corchorus olitorius
NCBI taxonomy Id: 93759
Other names: C. olitorius, Corchorus olitorius L., Nalta jute, Pseudocorchorus sp. Randrianasolo 519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.