Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_00318 | COLO4_05033 | A0A1R3L466 | A0A1R3KS26 | Amino acid transporter, transmembrane. | Autophagy-related protein 17. | 0.568 |
COLO4_00318 | COLO4_05782 | A0A1R3L466 | A0A1R3KPW5 | Amino acid transporter, transmembrane. | Uncharacterized protein. | 0.637 |
COLO4_00318 | COLO4_08633 | A0A1R3L466 | A0A1R3KF31 | Amino acid transporter, transmembrane. | WD_REPEATS_REGION domain-containing protein. | 0.568 |
COLO4_00318 | COLO4_08634 | A0A1R3L466 | A0A1R3KF24 | Amino acid transporter, transmembrane. | Regulatory associated protein of TOR. | 0.568 |
COLO4_00318 | COLO4_10540 | A0A1R3L466 | A0A1R3K861 | Amino acid transporter, transmembrane. | V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.573 |
COLO4_00318 | COLO4_13344 | A0A1R3L466 | A0A1R3JX01 | Amino acid transporter, transmembrane. | V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.573 |
COLO4_00318 | COLO4_25163 | A0A1R3L466 | A0A1R3I4E9 | Amino acid transporter, transmembrane. | V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. | 0.721 |
COLO4_00318 | COLO4_26094 | A0A1R3L466 | A0A1R3HYQ9 | Amino acid transporter, transmembrane. | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | 0.701 |
COLO4_00318 | COLO4_28679 | A0A1R3L466 | A0A1R3HIQ6 | Amino acid transporter, transmembrane. | WD_REPEATS_REGION domain-containing protein. | 0.674 |
COLO4_00318 | COLO4_31156 | A0A1R3L466 | A0A1R3H5I3 | Amino acid transporter, transmembrane. | Uncharacterized protein; Belongs to the peptidase S8 family. | 0.660 |
COLO4_05033 | COLO4_00318 | A0A1R3KS26 | A0A1R3L466 | Autophagy-related protein 17. | Amino acid transporter, transmembrane. | 0.568 |
COLO4_05033 | COLO4_05782 | A0A1R3KS26 | A0A1R3KPW5 | Autophagy-related protein 17. | Uncharacterized protein. | 0.905 |
COLO4_05033 | COLO4_08633 | A0A1R3KS26 | A0A1R3KF31 | Autophagy-related protein 17. | WD_REPEATS_REGION domain-containing protein. | 0.868 |
COLO4_05033 | COLO4_08634 | A0A1R3KS26 | A0A1R3KF24 | Autophagy-related protein 17. | Regulatory associated protein of TOR. | 0.868 |
COLO4_05033 | COLO4_28679 | A0A1R3KS26 | A0A1R3HIQ6 | Autophagy-related protein 17. | WD_REPEATS_REGION domain-containing protein. | 0.903 |
COLO4_05782 | COLO4_00318 | A0A1R3KPW5 | A0A1R3L466 | Uncharacterized protein. | Amino acid transporter, transmembrane. | 0.637 |
COLO4_05782 | COLO4_05033 | A0A1R3KPW5 | A0A1R3KS26 | Uncharacterized protein. | Autophagy-related protein 17. | 0.905 |
COLO4_05782 | COLO4_08633 | A0A1R3KPW5 | A0A1R3KF31 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
COLO4_05782 | COLO4_08634 | A0A1R3KPW5 | A0A1R3KF24 | Uncharacterized protein. | Regulatory associated protein of TOR. | 0.993 |
COLO4_05782 | COLO4_28679 | A0A1R3KPW5 | A0A1R3HIQ6 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.992 |
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