STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU91752.1Uroporphyrinogen III decarboxylase. (356 aa)    
Predicted Functional Partners:
ADU92455.1
Porphobilinogen deaminase.
 
 0.979
ADU91580.1
Coproporphyrinogen III oxidase, oxygen-independent.
 
 
 0.953
ADU92454.1
Hypothetical protein.
  
 
 0.933
ADU91166.1
Ferrochelatase, protoheme ferro-lyase.
 
  
 0.881
ADU91461.1
Porphobilinogen synthase.
 
 
 0.667
ADU91753.1
Helicase PriA; Essential for oriC/DnaA-independent DNA replication.
       0.643
ADU91751.1
Hypothetical protein.
       0.642
ADU92463.1
Hypothetical protein.
  
 
 0.638
ADU91814.1
Glutamyl-tRNA reductase.
 
  
 0.562
ADU91365.1
Glutamate-1-semialdehyde aminotransferase.
 
  
 0.559
Your Current Organism:
Taylorella equigenitalis
NCBI taxonomy Id: 937774
Other names: T. equigenitalis MCE9, Taylorella equigenitalis MCE9, Taylorella equigenitalis str. MCE9, Taylorella equigenitalis strain MCE9
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