STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ36968.1Formylmethanofuran dehydrogenase, subunit F; PFAM: 4Fe-4S binding domain; InterPro IPR001450; KEGG: mpi:Mpet_2474 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (385 aa)    
Predicted Functional Partners:
EHQ36965.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 
 0.999
EHQ36969.1
Formylmethanofuran dehydrogenase, subunit G; PFAM: 4Fe-4S binding domain; InterPro IPR001450; KEGG: mem:Memar_0627 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Formylmethanofuran dehydrogenase, subunit G.
 
 0.999
EHQ34622.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; COGs: COG1035 Coenzyme F420-reducing hydrogenase beta subunit; InterPro IPR007516:IPR007525:IPR001450; KEGG: mpi:Mpet_1047 coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein; PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain [...]
  
 
 0.998
EHQ36963.1
PFAM: Molydopterin dinucleotide binding domain; COGs: COG1153 Formylmethanofuran dehydrogenase subunit D; InterPro IPR006657; KEGG: mpi:Mpet_1630 molybdopterin dinucleotide-binding region; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin dinucleotide-binding region.
 
 0.998
EHQ36955.1
PFAM: Molydopterin dinucleotide binding domain; COGs: COG1153 Formylmethanofuran dehydrogenase subunit D; InterPro IPR006657; KEGG: mpi:Mpet_1634 molybdopterin dinucleotide-binding region; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin dinucleotide-binding region.
 
 0.993
EHQ34506.1
InterPro IPR001450; KEGG: mpi:Mpet_1202 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
0.992
EHQ36966.1
PFAM: Cysteine-rich domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit B; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017:IPR017678; KEGG: mpi:Mpet_2478 CoB/CoM heterodisulfide reductase subunit B; PFAM: Cysteine-rich region, CCG; SPTR: CoB/CoM heterodisulfide reductase, subunit B; TIGRFAM: CoB--CoM heterodisulphide reductase, subunit B.
 
 
 
 0.992
EHQ36967.1
TIGRFAM: CoB--CoM heterodisulfide reductase, subunit C; COGs: COG1150 Heterodisulfide reductase subunit C; InterPro IPR017680; KEGG: mpi:Mpet_2479 CoB/CoM heterodisulfide reductase subunit C; SPTR: CoB/CoM heterodisulfide reductase, subunit C; TIGRFAM: CoB--CoM heterodisulphide reductase, subunit C.
 
 
 
 0.992
EHQ36961.1
PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; COGs: COG1229 Formylmethanofuran dehydrogenase subunit A; InterPro IPR013108:IPR012027; KEGG: mpi:Mpet_1632 formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; SPTR: Formylmethanofuran dehydrogenase subunit A; TIGRFAM: Formylmethanofuran dehydrogenase, subunit A.
 
 0.989
EHQ36960.1
PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR002489:IPR017550; KEGG: mpi:Mpet_1633 formylmethanofuran dehydrogenase subunit C; PFAM: Glutamate synthase, alpha subunit, C-terminal; SPTR: Formylmethanofuran dehydrogenase subunit C; TIGRFAM: Formylmethanofuran dehydrogenase subunit C.
 
 0.987
Your Current Organism:
Methanoplanus limicola
NCBI taxonomy Id: 937775
Other names: M. limicola DSM 2279, Methanoplanus limicola DSM 2279, Methanoplanus limicola str. DSM 2279, Methanoplanus limicola strain DSM 2279
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